RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 ITGALP20701 1170 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 GCKP35557 465 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 HPCAP84074 193 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 INSCQ1MX18 579 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 MTBPQ96DY7 904 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 HES6Q96HZ4 224 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 ASPSCR1Q9BZE9 553 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 BRD8Q9H0E9 1235 aa12.61□□□□□ -0.39
UBE3B-203ENST00000434735 LUC7L3O95232 432 aaKnown RBP12.6□□□□□ -0.39
UBE3B-203ENST00000434735 ALOX15P16050 662 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-203ENST00000434735 C2orf54Q08AI8 447 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 STAT4Q14765 748 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 VSIG10LQ86VR7 867 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 DENND1CQ8IV53 801 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 GNSP15586 552 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 CHKAP35790 457 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 CCT5P48643 541 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 P3H1Q32P28 736 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 WDR49Q8IV35 697 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 SYTL1Q8IYJ3 562 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 ZNF557Q8N988 423 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-203ENST00000434735 RFWD2Q8NHY2 731 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 PPTC7Q8NI37 304 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 SLC2A14Q8TDB8 520 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 OLFML3Q9NRN5 406 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 GTF3C4Q9UKN8 822 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 ARVCFO00192 962 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 COPEO14579 308 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 SUPT3HO75486 399 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 TYK2P29597 1187 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 PIGHQ14442 188 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-203ENST00000434735 TTLL9Q3SXZ7 439 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 Q4G0T1 1027 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 FAM136AQ96C01 138 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.6□□□□□ -0.39
UBE3B-203ENST00000434735 SPASTQ9UBP0 616 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 KANSL1LA0AUZ9 987 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 C5orf58C9J3I9 102 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 RAMP2O60895 175 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 USP17L7P0C7H9 530 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 NRIP1P48552 1158 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 NDST1P52848 882 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 EPHB4P54760 987 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 SMAD3P84022 425 aaKnown RBP12.6□□□□□ -0.39
UBE3B-203ENST00000434735 SLFN11Q7Z7L1 901 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 CRLF3Q8IUI8 442 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 TAGAPQ8N103 731 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 TTC17Q96AE7 1141 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 TMEM176AQ96HP8 235 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 NLNQ9BYT8 704 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 ZFP14Q9HCL3 533 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.6□□□□□ -0.39
UBE3B-203ENST00000434735 DEC1Q9P2X7 70 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 PNMA8BQ9ULN7 279 aaPredicted RBP12.6□□□□□ -0.39
UBE3B-203ENST00000434735 FRMD3A2A2Y4 597 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 KRT14P02533 472 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 RHBDL3P58872 404 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 KCTD16Q68DU8 428 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 DHX40Q8IX18 779 aaKnown RBP12.6□□□□□ -0.39
UBE3B-203ENST00000434735 FAR2Q96K12 515 aa12.6□□□□□ -0.39
UBE3B-203ENST00000434735 UTP6Q9NYH9 597 aaKnown RBP12.6□□□□□ -0.39
UBE3B-203ENST00000434735 SOAT1P35610 550 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 BRCC3P46736 316 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 ZNF200P98182 395 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 GABPB1Q06547 395 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 GRIK3Q13003 919 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 CYP4X1Q8N118 509 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 MAML1Q92585 1016 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 GLMNQ92990 594 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 SERPINB11Q96P15 392 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 IL17RBQ9NRM6 502 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 GPN3Q9UHW5 284 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 CCDC130P13994 396 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 ERVK-21P61565 698 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 PDIA2Q13087 525 aaKnown RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 HLA-DQA1Q5Y7H0 255 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 ARMCX6Q7L4S7 300 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 NPAS4Q8IUM7 802 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 C10orf53Q8N6V4 93 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 ADGRE3Q9BY15 652 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 RAB6BQ9NRW1 208 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 TNFSF13BQ9Y275 285 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 SNX24Q9Y343 169 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 ATMINO43313 823 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 CD2BP2O95400 341 aaKnown RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 EEF1DP29692 281 aaKnown RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 DUSP4Q13115 394 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 DDR2Q16832 855 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 WDR75Q8IWA0 830 aaKnown RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 FGFR1OP2Q9NVK5 253 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 KLHL3Q9UH77 587 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 DNMT3LQ9UJW3 386 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 KIAA1257Q9ULG3 409 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 A0A0G2JLL6 359 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 FAM86B1E9PN63 330 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 FAM86B2P0C5J1 330 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 CYP2A6P11509 494 aaPredicted RBP12.59□□□□□ -0.39
UBE3B-203ENST00000434735 STK4Q13043 487 aa12.59□□□□□ -0.39
UBE3B-203ENST00000434735 KHDRBS2Q5VWX1 349 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms