RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 ATP1A3P13637 1013 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 TCF3P15923 654 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 RFX1P22670 979 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 BRD2P25440 801 aaKnown RBP19.38■□□□□ 0.69
HLA-F-220ENST00000434407 PLA2G4AP47712 749 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 TUBP50607 506 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 PDE6CP51160 858 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 PDE4CQ08493 712 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 IFRD2Q12894 506 aaPredicted RBP19.38■□□□□ 0.69
HLA-F-220ENST00000434407 GRM2Q14416 872 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 NFKBIBQ15653 356 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 MEA1Q16626 185 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 ARHGAP44Q17R89 818 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 PIGZQ86VD9 579 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 GPIHBP1Q8IV16 184 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 ARL14EPQ8N8R7 260 aaPredicted RBP19.38■□□□□ 0.69
HLA-F-220ENST00000434407 SMG9Q9H0W8 520 aaKnown RBP19.38■□□□□ 0.69
HLA-F-220ENST00000434407 TRPC7Q9HCX4 862 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 GMIPQ9P107 970 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 CHORDC1Q9UHD1 332 aaPredicted RBP19.38■□□□□ 0.69
HLA-F-220ENST00000434407 SIK3Q9Y2K2 1263 aa19.38■□□□□ 0.69
HLA-F-220ENST00000434407 TULP2O00295 520 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 DPYSL4O14531 572 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 CHADO15335 359 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 CALCAP01258 141 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 CFHP08603 1231 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 SETSIPP0DME0 302 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 KRT5P13647 590 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 UCHL3P15374 230 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 HDCP19113 662 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 CDK11BP21127 795 aaKnown RBP19.37■□□□□ 0.69
HLA-F-220ENST00000434407 PGFP49763 221 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 SLC8A3P57103 927 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 SLC7A9P82251 487 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 PFKPQ01813 784 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 HFE2Q6ZVN8 426 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 CCDC186Q7Z3E2 898 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 RIN3Q8TB24 985 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 BPIFB1Q8TDL5 484 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 SLC35F5Q8WV83 523 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 DNASE1L2Q92874 299 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 LRFN3Q9BTN0 628 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 LSM14BQ9BX40 385 aaKnown RBP19.37■□□□□ 0.69
HLA-F-220ENST00000434407 RNF38Q9H0F5 515 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 GANQ9H2C0 597 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 ARHGAP26Q9UNA1 814 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 FHOD1Q9Y613 1164 aa19.37■□□□□ 0.69
HLA-F-220ENST00000434407 KRBA1A5PL33 1030 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 FOXN3O00409 490 aaPredicted RBP19.36■□□□□ 0.69
HLA-F-220ENST00000434407 USP4Q13107 963 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 ZNF77Q15935 545 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 FKBP15Q5T1M5 1219 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 IER5LQ5T953 404 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 PM20D1Q6GTS8 502 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 FAM71AQ8IYT1 594 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 ZNF276Q8N554 614 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 UBA3Q8TBC4 463 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 ZNF606Q8WXB4 792 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 KCTD13Q8WZ19 329 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 IRF7Q92985 503 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 ERGIC2Q96RQ1 377 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 CBX8Q9HC52 389 aa19.36■□□□□ 0.69
HLA-F-220ENST00000434407 TLR8Q9NR97 1041 aaKnown RBP19.36■□□□□ 0.69
HLA-F-220ENST00000434407 CYP26A1O43174 497 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 CKMP06732 381 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 GDI1P31150 447 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 CLCN1P35523 988 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 ZXDBP98169 803 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 DRAP1Q14919 205 aaPredicted RBP19.35■□□□□ 0.69
HLA-F-220ENST00000434407 ARHGAP29Q52LW3 1261 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 HECTD3Q5T447 861 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 SCML4Q8N228 414 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 KIAA1958Q8N8K9 716 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 BRD9Q9H8M2 597 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 ACP6Q9NPH0 428 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 CYLDQ9NQC7 956 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 OSER1Q9NX31 292 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 FBXL21Q9UKT6 434 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 DAAM1Q9Y4D1 1078 aa19.35■□□□□ 0.69
HLA-F-220ENST00000434407 M0QYV0 167 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 ZNF263O14978 683 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 COCHO43405 550 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 GABBR2O75899 941 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 PDGFBP01127 241 aaPredicted RBP19.34■□□□□ 0.69
HLA-F-220ENST00000434407 GNA15P30679 374 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 GPD2P43304 727 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 RPL34P49207 117 aaKnown RBP19.34■□□□□ 0.69
HLA-F-220ENST00000434407 PSEN1P49768 467 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 KLK7P49862 253 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 PLCB2Q00722 1185 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 SLC44A4Q53GD3 710 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 PMF1Q6P1K2 205 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 BHLHA9Q7RTU4 235 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 SCD5Q86SK9 330 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 SIX5Q8N196 739 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 PBXIP1Q96AQ6 731 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 HSFY1Q96LI6 401 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 FAM83CQ9BQN1 747 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 STK33Q9BYT3 514 aa19.34■□□□□ 0.69
HLA-F-220ENST00000434407 CCSER2Q9H7U1 834 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms