RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TREML2Q5T2D2 321 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 DNAJC24Q6P3W2 148 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 DLK2Q6UY11 383 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 MMS22LQ6ZRQ5 1243 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 PIGWQ7Z7B1 504 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 SUGP1Q8IWZ8 645 aaKnown RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 C10orf67Q8IYJ2 551 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 THNSL1Q8IYQ7 743 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 ALLCQ8N6M5 410 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 ANKS4BQ8N8V4 417 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 USP6NLQ92738 828 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 ZBTB45Q96K62 511 aaPredicted RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 SCLT1Q96NL6 688 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 SLITRK1Q96PX8 696 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 TSPAN18Q96SJ8 248 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 C11orf70Q9BRQ4 267 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 ASCC2Q9H1I8 757 aaPredicted RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 CENPHQ9H3R5 247 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 CHST7Q9NS84 486 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 CISHQ9NSE2 258 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 INTS9Q9NV88 658 aaKnown RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 ANAPC5Q9UJX4 755 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 SCAF8Q9UPN6 1271 aaKnown RBP7.82□□□□□ -1.16
COL17A1-204ENST00000433822 TELO2Q9Y4R8 837 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 VCANP13611 3396 aa7.82□□□□□ -1.16
COL17A1-204ENST00000433822 RALGAPA2Q2PPJ7 1873 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 PLXNA1Q9UIW2 1896 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 GOLGA6L7A0A1B0GV03 622 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 O00370 1275 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 LILRB5O75023 590 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 HMGCRP04035 888 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 HOXD8P13378 290 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ELNP15502 786 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 CHN1P15882 459 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 CDKN2BP42772 138 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ASPAP45381 313 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 KCNJ1P48048 391 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ITGA8P53708 1063 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 SEC24CP53992 1094 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 VCPP55072 806 aaKnown RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 MYL6P60660 151 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 CDC42EP1Q00587 391 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 NRG1Q02297 640 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 SP4Q02446 784 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ACTN3Q08043 901 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF252P-AS1Q0IIN9 211 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 INCA1Q0VD86 236 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 TTLL4Q14679 1199 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 KCTD2Q14681 263 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 MBTPS1Q14703 1052 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 CNGA2Q16280 664 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 HADHQ16836 314 aaKnown RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 EML3Q32P44 896 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ZBTB41Q5SVQ8 909 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ATF7IP2Q5U623 682 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 WDR78Q5VTH9 848 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 SPOPLQ6IQ16 392 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 SPOCD1Q6ZMY3 1216 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 C20orf204Q6ZNR8 217 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 RGS9BPQ6ZS82 235 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 CCDC121Q6ZUS5 278 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 BBS12Q6ZW61 710 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 CTU1Q7Z7A3 348 aaKnown RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ERICH1Q86X53 443 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 NCAPG2Q86XI2 1143 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 CPNE8Q86YQ8 564 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 GBP7Q8N8V2 638 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 RNF149Q8NC42 400 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 CCDC197Q8NCU1 140 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 SLC35B2Q8TB61 432 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 C1orf54Q8WWF1 131 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 GRAMD1AQ96CP6 724 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 SGSM3Q96HU1 749 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 SEC16BQ96JE7 1060 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 CFAP57Q96MR6 1250 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 FRMD8Q9BZ67 464 aaPredicted RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 TRIM7Q9C029 511 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 MTMR12Q9C0I1 747 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF408Q9H9D4 720 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 RPF1Q9H9Y2 349 aaKnown RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 SSU72Q9NP77 194 aaKnown RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 VTA1Q9NP79 307 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ERAP1Q9NZ08 941 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 BCCIPQ9P287 314 aaKnown RBP eCLIP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 DDX20Q9UHI6 824 aaKnown RBP7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF232Q9UNY5 417 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 DERAQ9Y315 318 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 C2CD2Q9Y426 696 aa7.81□□□□□ -1.16
COL17A1-204ENST00000433822 ZNF236Q9UL36 1845 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 DCDC2CA8MYV0 355 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 FAM155BO75949 473 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 ENDOD1O94919 500 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 ARIH2O95376 493 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 C22orf31O95567 290 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 CST3P01034 146 aaPredicted RBP7.8□□□□□ -1.16
COL17A1-204ENST00000433822 ERBB2P04626 1255 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 SETSIPP0DME0 302 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 VDRP11473 427 aa7.8□□□□□ -1.16
COL17A1-204ENST00000433822 FGFR4P22455 802 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms