RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 CXADRP78310 365 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 ABHD18Q0P651 414 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 TP53BP2Q13625 1128 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 GCKRQ14397 625 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 MINDY4Q4G0A6 757 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 FOXR2Q6PJQ5 311 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 OVCH2Q7RTZ1 564 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 FAM9BQ8IZU0 186 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 AOPEPQ8N6M6 819 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 CELF5Q8N6W0 485 aaKnown RBP6.77□□□□□ -1.33
HDAC9-213ENST00000433709 SLC16A11Q8NCK7 471 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 PDPRQ8NCN5 879 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 NSUN7Q8NE18 718 aaKnown RBP6.77□□□□□ -1.33
HDAC9-213ENST00000433709 TBC1D16Q8TBP0 767 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 LARP4BQ92615 738 aaKnown RBP6.77□□□□□ -1.33
HDAC9-213ENST00000433709 CELF1Q92879 486 aaKnown RBP6.77□□□□□ -1.33
HDAC9-213ENST00000433709 NACC2Q96BF6 587 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 RNF31Q96EP0 1072 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 FAM167AQ96KS9 214 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 COA1Q9GZY4 146 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 STAP2Q9UGK3 403 aa6.77□□□□□ -1.33
HDAC9-213ENST00000433709 MTO1Q9Y2Z2 717 aaKnown RBP6.77□□□□□ -1.33
HDAC9-213ENST00000433709 FANCIQ9NVI1 1328 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 ZNF785A8K8V0 405 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 E9PLN8 166 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 B3GALT2O43825 422 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 ECE2O60344 883 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 ERN1O75460 977 aaKnown RBP6.76□□□□□ -1.33
HDAC9-213ENST00000433709 ZFPL1O95159 310 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 SPDEFO95238 335 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 PARNO95453 639 aaKnown RBP6.76□□□□□ -1.33
HDAC9-213ENST00000433709 ADH4P08319 380 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 KCNJ4P48050 445 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 CTCFP49711 727 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-213ENST00000433709 GPSM2P81274 684 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 GUCY1B3Q02153 619 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 KLF10Q13118 480 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 IFIT5Q13325 482 aaKnown RBP6.76□□□□□ -1.33
HDAC9-213ENST00000433709 SPDYE7PQ495Y7 208 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 ARHGAP29Q52LW3 1261 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 LY6G5CQ5SRR4 150 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 ZNF627Q7L945 461 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 PDSS2Q86YH6 399 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 VRK3Q8IV63 474 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 WDR75Q8IWA0 830 aaKnown RBP6.76□□□□□ -1.33
HDAC9-213ENST00000433709 TSPYL6Q8N831 410 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 Q8NA96 180 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 NEU4Q8WWR8 484 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-213ENST00000433709 VKORC1Q9BQB6 163 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 C9orf78Q9NZ63 289 aaPredicted RBP6.76□□□□□ -1.33
HDAC9-213ENST00000433709 CFAP97Q9P2B7 532 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 KCNE5Q9UJ90 142 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 HDAC9Q9UKV0 1011 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 PCDHA6Q9UN73 950 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 NOX1Q9Y5S8 564 aa6.76□□□□□ -1.33
HDAC9-213ENST00000433709 MED23Q9ULK4 1368 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 CDKL5O76039 1030 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 IGKV5-2P06315 115 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 CSF1RP07333 972 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 HSPA1AP0DMV8 641 aaKnown RBP6.75□□□□□ -1.33
HDAC9-213ENST00000433709 HSPA1BP0DMV9 641 aaKnown RBP6.75□□□□□ -1.33
HDAC9-213ENST00000433709 HDCP19113 662 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 NF2P35240 595 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 IL12RB1P42701 662 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 GDF5P43026 501 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 FKBP1BP68106 108 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 EXOSC9Q06265 439 aaKnown RBP6.75□□□□□ -1.33
HDAC9-213ENST00000433709 KIF22Q14807 665 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 CCDC57Q2TAC2 916 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 ARHGEF19Q8IW93 802 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 CFAP52Q8N1V2 620 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 TTC8Q8TAM2 541 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 SCAMP4Q969E2 229 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 LRIG1Q96JA1 1093 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 NT5C1BQ96P26 610 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 MED15Q96RN5 788 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 WDR11Q9BZH6 1224 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 DBNDD1Q9H9R9 158 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 MRPS18AQ9NVS2 196 aaKnown RBP6.75□□□□□ -1.33
HDAC9-213ENST00000433709 POLLQ9UGP5 575 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 DDX20Q9UHI6 824 aaKnown RBP6.75□□□□□ -1.33
HDAC9-213ENST00000433709 CPA4Q9UI42 421 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 ING1Q9UK53 422 aaPredicted RBP6.75□□□□□ -1.33
HDAC9-213ENST00000433709 AGAP1Q9UPQ3 857 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 ZNF609O15014 1411 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 PTPRCP08575 1304 aa6.75□□□□□ -1.33
HDAC9-213ENST00000433709 WDR33Q9C0J8 1336 aaKnown RBP6.75□□□□□ -1.33
HDAC9-213ENST00000433709 A0A088AWK7 358 aa6.74□□□□□ -1.33
HDAC9-213ENST00000433709 VSTM5A8MXK1 200 aa6.74□□□□□ -1.33
HDAC9-213ENST00000433709 CCER2I3L3R5 266 aa6.74□□□□□ -1.33
HDAC9-213ENST00000433709 PSMD14O00487 310 aa6.74□□□□□ -1.33
HDAC9-213ENST00000433709 PPFIA4O75335 1185 aa6.74□□□□□ -1.33
HDAC9-213ENST00000433709 TUSC2O75896 110 aa6.74□□□□□ -1.33
HDAC9-213ENST00000433709 RARBP10826 455 aa6.74□□□□□ -1.33
HDAC9-213ENST00000433709 CCT4P50991 539 aaKnown RBP6.74□□□□□ -1.33
HDAC9-213ENST00000433709 ZNF135P52742 658 aaPredicted RBP6.74□□□□□ -1.33
HDAC9-213ENST00000433709 RAB1AP62820 205 aa6.74□□□□□ -1.33
HDAC9-213ENST00000433709 MXRA7P84157 204 aa6.74□□□□□ -1.33
HDAC9-213ENST00000433709 ZNF844Q08AG5 666 aa6.74□□□□□ -1.33
HDAC9-213ENST00000433709 PTPAQ15257 358 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms