RNA–Protein interactions for RNA: ENST00000433655.5

CTSD-204, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 2,006 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-204ENST00000433655 MIS12Q9H081 205 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 SLC24A2Q9UI40 661 aa17.76■□□□□ 0.43
CTSD-204ENST00000433655 GNEQ9Y223 722 aaKnown RBP17.76■□□□□ 0.43
CTSD-204ENST00000433655 PRPF4O43172 522 aaKnown RBP eCLIP17.75■□□□□ 0.437e-7■■■□□ 14.8
CTSD-204ENST00000433655 ATP2C2O75185 946 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 SPAG7O75391 227 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 RECQL4O94761 1208 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 SETSIPP0DME0 302 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 DARSP14868 501 aaKnown RBP17.75■□□□□ 0.43
CTSD-204ENST00000433655 STX2P32856 288 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 ROR1Q01973 937 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 CA9Q16790 459 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 C9orf57Q5W0N0 161 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 NOTUMQ6P988 496 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 ZC3H18Q86VM9 953 aaKnown RBP17.75■□□□□ 0.43
CTSD-204ENST00000433655 SCUBE3Q8IX30 993 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 FAM172AQ8WUF8 416 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 TMEM40Q8WWA1 233 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 USP6NLQ92738 828 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 LENG1Q96BZ8 264 aaPredicted RBP17.75■□□□□ 0.43
CTSD-204ENST00000433655 DHRS4Q9BTZ2 278 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 B3GNT5Q9BYG0 378 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 ADAM33Q9BZ11 813 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 TRABDQ9H4I3 376 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 ABCF3Q9NUQ8 709 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 NKIRAS1Q9NYS0 192 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 XPO7Q9UIA9 1087 aaKnown RBP17.75■□□□□ 0.43
CTSD-204ENST00000433655 CLEC11AQ9Y240 323 aa17.75■□□□□ 0.43
CTSD-204ENST00000433655 TRIP12Q14669 1992 aaPredicted RBP17.75■□□□□ 0.43
CTSD-204ENST00000433655 DOCK3Q8IZD9 2030 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 DYNC1LI2O43237 492 aaPredicted RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 ASMTLO95671 621 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 TFE3P19532 575 aaPredicted RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 TAC1P20366 129 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 MTM1Q13496 603 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 ARHGAP17Q68EM7 881 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 PPP1R21Q6ZMI0 780 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 PLD5Q8N7P1 536 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 FBXO36Q8NEA4 188 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 KBTBD7Q8WVZ9 684 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 SGSM3Q96HU1 749 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 PARK7Q99497 189 aaKnown RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 USP29Q9HBJ7 922 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 PCDH18Q9HCL0 1135 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 NGRNQ9NPE2 291 aaKnown RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.74■□□□□ 0.437e-17■□□□□ 10.2
CTSD-204ENST00000433655 USP15Q9Y4E8 981 aaPredicted RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 NRCAMQ92823 1304 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 PCNTO95613 3336 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 SMIM35A0A1B0GVV1 85 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 A0A1W2PPM1 405 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 H0YHG0 523 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 RASSF9O75901 435 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 FGFR1P11362 822 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 HNRNPH1P31943 449 aaKnown RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 HDAC4P56524 1084 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 ADAM17P78536 824 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 TFDP2Q14188 446 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 KCNJ11Q14654 390 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 ZKSCAN8Q15776 578 aaPredicted RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 FAM47CQ5HY64 1035 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 DARS2Q6PI48 645 aaKnown RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 C1orf228Q6PIY5 440 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 TRPM8Q7Z2W7 1104 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 SESTD1Q86VW0 696 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 ATP11CQ8NB49 1132 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 BEST2Q8NFU1 509 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 CLEC4CQ8WTT0 213 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 PYROXD1Q8WU10 500 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 TEKT4Q8WW24 435 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 C11orf84Q9BUA3 381 aaPredicted RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 SNRNP25Q9BV90 132 aaKnown RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 PPCSQ9HAB8 311 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 PSMC3IPQ9P2W1 217 aaPredicted RBP17.74■□□□□ 0.43
CTSD-204ENST00000433655 FETUBQ9UGM5 382 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 GRID1Q9ULK0 1009 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 SLC12A4Q9UP95 1085 aa17.74■□□□□ 0.43
CTSD-204ENST00000433655 SLC15A5A6NIM6 579 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 PIRO00625 290 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 SPTLC1O15269 473 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 CYP2C9P11712 490 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 AKAP5P24588 427 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 SLC18A1P54219 525 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 YARSP54577 528 aaKnown RBP17.73■□□□□ 0.43
CTSD-204ENST00000433655 GEMIN4P57678 1058 aaKnown RBP17.73■□□□□ 0.43
CTSD-204ENST00000433655 BASP1P80723 227 aaKnown RBP17.73■□□□□ 0.43
CTSD-204ENST00000433655 PDK2Q15119 407 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 SPRYD7Q5W111 196 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 UNC93AQ86WB7 457 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 IGDCC3Q8IVU1 814 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 C4orf33Q8N1A6 199 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 OR6B3Q8NGW1 331 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 PCDH19Q8TAB3 1148 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 STK32AQ8WU08 396 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 MZB1Q8WU39 189 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 MRRFQ96E11 262 aaKnown RBP17.73■□□□□ 0.43
CTSD-204ENST00000433655 MAK16Q9BXY0 300 aaKnown RBP17.73■□□□□ 0.43
CTSD-204ENST00000433655 ACSS3Q9H6R3 686 aa17.73■□□□□ 0.43
CTSD-204ENST00000433655 PRKAG3Q9UGI9 489 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms