RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 CCNG1P51959 295 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 KBTBD12Q3ZCT8 623 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 RAB6CQ53S08 254 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 FAM182AQ5T1J6 154 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 JADE1Q6IE81 842 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 TRNP1Q6NT89 227 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 SERAC1Q96JX3 654 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 RAB6CQ9H0N0 254 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 ALG13Q9NP73 1137 aaKnown RBP13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 SAR1AQ9NR31 198 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 SLC5A4Q9NY91 659 aa13.89□□□□□ -0.19
SNRNP200-202ENST00000429650 USP2O75604 605 aaPredicted RBP13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 HMGCRP04035 888 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 GM2AP17900 193 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 GPD1P21695 349 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 ETV4P43268 484 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 ZNF200P98182 395 aaPredicted RBP13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 FAAP100Q0VG06 881 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 VGLL4Q14135 290 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 ANKRD20A2Q5SQ80 823 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 SYCP2LQ5T4T6 812 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 ANKRD20A1Q5TYW2 823 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 ANKRD20A3Q5VUR7 823 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 EFCAB12Q6NXP0 572 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 SH2D5Q6ZV89 423 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 UBA3Q8TBC4 463 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 APOPT1Q96IL0 206 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 CNPY3Q9BT09 278 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 RNPEPL1Q9HAU8 725 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 LNPEPQ9UIQ6 1025 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 POLR2AP24928 1970 aaKnown RBP13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 C2CD4BA6NLJ0 364 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 STAG3L1P0CL83 205 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 VDRP11473 427 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 PTPN4P29074 926 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 YWHAGP61981 247 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■□□□ 13.5
SNRNP200-202ENST00000429650 SLC18A2Q05940 514 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 CRYMQ14894 314 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 LRRC6Q86X45 466 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 CHSY1Q86X52 802 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 MIEF2Q96C03 454 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 FGD4Q96M96 766 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 SPATA33Q96N06 139 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 TSSK1BQ9BXA7 367 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 ASCC2Q9H1I8 757 aaPredicted RBP13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 CYP3A43Q9HB55 503 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 PPP2R3BQ9Y5P8 575 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 IKBKGQ9Y6K9 419 aa13.88□□□□□ -0.19
SNRNP200-202ENST00000429650 CHADO15335 359 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 INHBAP08476 426 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 GNAZP19086 355 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 TFDP2Q14188 446 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 NAA25Q14CX7 972 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 C15orf59Q2T9L4 293 aaPredicted RBP13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 FAM47CQ5HY64 1035 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 WDR78Q5VTH9 848 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 KIRREL3Q8IZU9 778 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 RXFP2Q8WXD0 754 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 FAF2Q96CS3 445 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 PIWIL1Q96J94 861 aaKnown RBP13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 HEXIM2Q96MH2 286 aaKnown RBP13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 TRIM55Q9BYV6 548 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 TLE6Q9H808 572 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 VRTNQ9H8Y1 702 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 USP29Q9HBJ7 922 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 MCM3APO60318 1980 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 LTBP3Q9NS15 1303 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 A0A0G2JND7 137 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 H7C0C1 242 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 PIK3R2O00459 728 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 AVILO75366 819 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 SPAG6O75602 509 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 PGK2P07205 417 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 PDGFRAP16234 1089 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 CYP3A5P20815 502 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 ATICP31939 592 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 ATP5OP48047 213 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 MAP1SQ66K74 1059 aaPredicted RBP13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 C1orf228Q6PIY5 440 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 DPH6Q7L8W6 267 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 SDR16C5Q8N3Y7 309 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 KCNV2Q8TDN2 545 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 RNF157Q96PX1 679 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 FAM111AQ96PZ2 611 aa13.87□□□□□ -0.19
SNRNP200-202ENST00000429650 HNRNPCL1O60812 293 aaKnown RBP13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 CSDE1O75534 798 aaKnown RBP13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 C1QAP02745 245 aa13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 PYGBP11216 843 aa13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 CALB2P22676 271 aa13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 CDO1Q16878 200 aa13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 FAM183BPQ6ZVS7 135 aa13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 APBB1IPQ7Z5R6 666 aaPredicted RBP13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 PRPF39Q86UA1 669 aaKnown RBP13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 STK32AQ8WU08 396 aa13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 COPS5Q92905 334 aa13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 IFT122Q9HBG6 1241 aa13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 RAB6BQ9NRW1 208 aa13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 PRMT7Q9NVM4 692 aaPredicted RBP13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 E5RJQ4 531 aa13.86□□□□□ -0.19
SNRNP200-202ENST00000429650 PRPSAP2O60256 369 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms