RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 DCAF8L1A6NGE4 600 aa13□□□□□ -0.33
CDH3-202ENST00000429102 ERBB2P04626 1255 aa13□□□□□ -0.33
CDH3-202ENST00000429102 CLCN3P51790 818 aa13□□□□□ -0.33
CDH3-202ENST00000429102 TCHHL1Q5QJ38 904 aaPredicted RBP13□□□□□ -0.33
CDH3-202ENST00000429102 EEF1DP3Q658K8 133 aa13□□□□□ -0.33
CDH3-202ENST00000429102 DENND5BQ6ZUT9 1274 aa13□□□□□ -0.33
CDH3-202ENST00000429102 NCAPG2Q86XI2 1143 aa13□□□□□ -0.33
CDH3-202ENST00000429102 MPP5Q8N3R9 675 aa13□□□□□ -0.33
CDH3-202ENST00000429102 RIBC1Q8N443 379 aaPredicted RBP13□□□□□ -0.33
CDH3-202ENST00000429102 DCAKDQ8WVC6 231 aa13□□□□□ -0.33
CDH3-202ENST00000429102 CORO1CQ9ULV4 474 aaPredicted RBP13□□□□□ -0.33
CDH3-202ENST00000429102 MYO18AQ92614 2054 aaKnown RBP13□□□□□ -0.33
CDH3-202ENST00000429102 BTAF1O14981 1849 aa13□□□□□ -0.33
CDH3-202ENST00000429102 TCEA3O75764 348 aa13□□□□□ -0.33
CDH3-202ENST00000429102 CIB2O75838 187 aa13□□□□□ -0.33
CDH3-202ENST00000429102 HMGCRP04035 888 aa13□□□□□ -0.33
CDH3-202ENST00000429102 ITGB3P05106 788 aa13□□□□□ -0.33
CDH3-202ENST00000429102 TBXAS1P24557 533 aaPredicted RBP13□□□□□ -0.33
CDH3-202ENST00000429102 PIGHQ14442 188 aaPredicted RBP13□□□□□ -0.33
CDH3-202ENST00000429102 PARP6Q2NL67 630 aa13□□□□□ -0.33
CDH3-202ENST00000429102 EFHC2Q5JST6 749 aa13□□□□□ -0.33
CDH3-202ENST00000429102 KBTBD2Q8IY47 623 aa13□□□□□ -0.33
CDH3-202ENST00000429102 BANPQ8N9N5 519 aa13□□□□□ -0.33
CDH3-202ENST00000429102 AGAP3Q96P47 875 aa13□□□□□ -0.33
CDH3-202ENST00000429102 CGRRF1Q99675 332 aa13□□□□□ -0.33
CDH3-202ENST00000429102 ACSS3Q9H6R3 686 aa13□□□□□ -0.33
CDH3-202ENST00000429102 SHOC2Q9UQ13 582 aa13□□□□□ -0.33
CDH3-202ENST00000429102 ACTL7BQ9Y614 415 aa13□□□□□ -0.33
CDH3-202ENST00000429102 SP100P23497 879 aaPredicted RBP12.99□□□□□ -0.33
CDH3-202ENST00000429102 CDK16Q00536 496 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 TCEAL1Q15170 157 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 RALGPS1Q5JS13 557 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 LPCAT4Q643R3 524 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 TRIM72Q6ZMU5 477 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 SPNS2Q8IVW8 549 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 E2F7Q96AV8 911 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 NIF3L1Q9GZT8 377 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 SENP1Q9P0U3 644 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 SLC24A2Q9UI40 661 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 DGKIO75912 1065 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 C6orf222P0C671 652 aaPredicted RBP12.99□□□□□ -0.33
CDH3-202ENST00000429102 OLIG2Q13516 323 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 TMEM132BQ14DG7 1078 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 SCUBE3Q8IX30 993 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 INPP5DQ92835 1189 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 B3GNT5Q9BYG0 378 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 C20orf27Q9GZN8 174 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 VCXQ9H320 206 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 ST6GALNAC4Q9H4F1 302 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 PICK1Q9NRD5 415 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 NOP56O00567 594 aaKnown RBP12.99□□□□□ -0.33
CDH3-202ENST00000429102 PRPSAP2O60256 369 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 OATP04181 439 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 PGK2P07205 417 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 ABHD2P08910 425 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 BCAR1P56945 870 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 NAT8LQ8N9F0 302 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 RXFP2Q8WXD0 754 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 MTBPQ96DY7 904 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 SNCAIPQ9Y6H5 919 aa12.99□□□□□ -0.33
CDH3-202ENST00000429102 COL5A3P25940 1745 aaPredicted RBP12.98□□□□□ -0.33
CDH3-202ENST00000429102 CFLARO15519 480 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 TNNC2P02585 160 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 POLR2BP30876 1174 aaKnown RBP12.98□□□□□ -0.33
CDH3-202ENST00000429102 SKIV2L2P42285 1042 aaKnown RBP12.98□□□□□ -0.33
CDH3-202ENST00000429102 STAT5BP51692 787 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 TGFB2P61812 414 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 SLC34A1Q06495 639 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 RBBP5Q15291 538 aaKnown RBP12.98□□□□□ -0.33
CDH3-202ENST00000429102 ZNF667Q5HYK9 610 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 PPP1R15BQ5SWA1 713 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 GJC2Q5T442 439 aaPredicted RBP12.98□□□□□ -0.33
CDH3-202ENST00000429102 C6orf163Q5TEZ5 329 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 C15orf39Q6ZRI6 1047 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 RIPOR1Q6ZS17 1223 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDH3-202ENST00000429102 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.98□□□□□ -0.33
CDH3-202ENST00000429102 DEPDC1BQ8WUY9 529 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 CPB2Q96IY4 423 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 NTPCRQ9BSD7 190 aaKnown RBP12.98□□□□□ -0.33
CDH3-202ENST00000429102 VPS11Q9H270 941 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 GOLGA8TH3BQL2 631 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 NEMP1O14524 444 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 LYPLA2O95372 231 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 PRKCBP05771 671 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 SUPT20HL2P0C7V6 817 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 PDE1BQ01064 536 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 ZRSR2Q15696 482 aaKnown RBP12.98□□□□□ -0.33
CDH3-202ENST00000429102 SUPT20HL1Q3ZLR7 823 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 ADGRD1Q6QNK2 874 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 SLC35B2Q8TB61 432 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 ZNF333Q96JL9 665 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 R3HDMLQ9H3Y0 253 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 KCNK13Q9HB14 408 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 MYOZ2Q9NPC6 264 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 ZNF358Q9NW07 568 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 IRAK4Q9NWZ3 460 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 TTLL3Q9Y4R7 772 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 SCN9AQ15858 1988 aa12.98□□□□□ -0.33
CDH3-202ENST00000429102 GOLGA8QA0A0J9YX86 632 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms