RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 GRAMD1AQ96CP6 724 aa11.97□□□□□ -0.49
CECR3-201ENST00000428828 PCMTD1Q96MG8 357 aaPredicted RBP11.97□□□□□ -0.49
CECR3-201ENST00000428828 NR1H4Q96RI1 486 aaPredicted RBP11.97□□□□□ -0.49
CECR3-201ENST00000428828 TSPAN18Q96SJ8 248 aa11.97□□□□□ -0.49
CECR3-201ENST00000428828 ELAC1Q9H777 363 aaKnown RBP11.97□□□□□ -0.49
CECR3-201ENST00000428828 TMEM8AQ9HCN3 771 aa11.97□□□□□ -0.49
CECR3-201ENST00000428828 UBN1Q9NPG3 1134 aa11.97□□□□□ -0.49
CECR3-201ENST00000428828 AIPL1Q9NZN9 384 aa11.97□□□□□ -0.49
CECR3-201ENST00000428828 STOML1Q9UBI4 398 aa11.97□□□□□ -0.49
CECR3-201ENST00000428828 PDE4DIPQ5VU43 2346 aa11.97□□□□□ -0.49
CECR3-201ENST00000428828 ATP8B3O60423 1300 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 TMEM221A6NGB7 291 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 SIGLEC16A6NMB1 481 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 TBKBP1A7MCY6 615 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 A8MUI8 341 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 EFCAB14O75071 495 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 LRRN2O75325 713 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 ATP6V1G1O75348 118 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 ITGB3P05106 788 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 THP07101 528 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 GSTT1P30711 240 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 EIF4A3P38919 411 aaKnown RBP11.96□□□□□ -0.49
CECR3-201ENST00000428828 PIK3CAP42336 1068 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 KLK7P49862 253 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 INHBCP55103 352 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 RNASELQ05823 741 aaKnown RBP11.96□□□□□ -0.49
CECR3-201ENST00000428828 SOX4Q06945 474 aaPredicted RBP11.96□□□□□ -0.49
CECR3-201ENST00000428828 RNF220Q5VTB9 566 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 KRT39Q6A163 491 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 URGCPQ8TCY9 931 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 DPP3Q9NY33 737 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 IL1RAPL1Q9NZN1 696 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 GCNT4Q9P109 453 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 HCSTQ9UBK5 93 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 SALL4Q9UJQ4 1053 aa11.96□□□□□ -0.49
CECR3-201ENST00000428828 CASTOR2A6NHX0 329 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 C4BPAP04003 597 aaKnown RBP11.96□□□□□ -0.5
CECR3-201ENST00000428828 CLDN10P78369 228 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 POU5F1Q01860 360 aaKnown RBP11.96□□□□□ -0.5
CECR3-201ENST00000428828 SULT2A1Q06520 285 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 TRADDQ15628 312 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 PPP2R5EQ16537 467 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 NOMO2Q5JPE7 1267 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 FOXB2Q5VYV0 432 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 C1orf127Q8N9H9 656 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 SMYD1Q8NB12 490 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 BEST2Q8NFU1 509 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 TAS1R2Q8TE23 839 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 DYDC1Q8WWB3 177 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 GATA6Q92908 595 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 PPP1R10Q96QC0 940 aaKnown RBP11.96□□□□□ -0.5
CECR3-201ENST00000428828 PSMB7Q99436 277 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 PI4K2AQ9BTU6 479 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 DCLRE1BQ9H816 532 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 PREBQ9HCU5 417 aa11.96□□□□□ -0.5
CECR3-201ENST00000428828 NKX1-2Q9UD57 310 aaPredicted RBP11.96□□□□□ -0.5
CECR3-201ENST00000428828 UBQLN1Q9UMX0 589 aaKnown RBP11.96□□□□□ -0.5
CECR3-201ENST00000428828 TRAFD1O14545 582 aaPredicted RBP11.95□□□□□ -0.5
CECR3-201ENST00000428828 KCNE1P15382 129 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 POLR2BP30876 1174 aaKnown RBP11.95□□□□□ -0.5
CECR3-201ENST00000428828 VHLP40337 213 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 TRPC3Q13507 836 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 ZACNQ401N2 412 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 XKR4Q5GH76 650 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 C9orf50Q5SZB4 431 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 TAOK1Q7L7X3 1001 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 RNF168Q8IYW5 571 aaPredicted RBP11.95□□□□□ -0.5
CECR3-201ENST00000428828 TAF4BQ92750 862 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 TOP1MTQ969P6 601 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 CASD1Q96PB1 797 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 GBP5Q96PP8 586 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 TBC1D13Q9NVG8 400 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 STK38LQ9Y2H1 464 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 DERAQ9Y315 318 aa11.95□□□□□ -0.5
CECR3-201ENST00000428828 PPEF2O14830 753 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 NVLO15381 856 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 HOXA2O43364 376 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 XPOTO43592 962 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 HNRNPCL1O60812 293 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 TJP3O95049 919 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 VNN1O95497 513 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 CST3P01034 146 aaPredicted RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 HLA-DRAP01903 254 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 PDHA1P08559 390 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 FAM200BP0CF97 657 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 SLC9A1P19634 815 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 GTF2H1P32780 548 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 PTDSS1P48651 473 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 SCNN1BP51168 640 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 ENPEPQ07075 957 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 DHX9Q08211 1270 aaKnown RBP11.94□□□□□ -0.5
CECR3-201ENST00000428828 CETN1Q12798 172 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 NCOA4Q13772 614 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 CNGA2Q16280 664 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 EXOC3L4Q17RC7 722 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 C15orf39Q6ZRI6 1047 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 NT5DC4Q86YG4 428 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 ZNF280BQ86YH2 543 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 CRIPAKQ8N1N5 446 aa11.94□□□□□ -0.5
CECR3-201ENST00000428828 FBXL13Q8NEE6 735 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms