RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 FGFBP2Q9BYJ0 223 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 IKZF4Q9H2S9 585 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 ST6GALNAC4Q9H4F1 302 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 SLC32A1Q9H598 525 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 ZFP14Q9HCL3 533 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 ZNF334Q9HCZ1 680 aaPredicted RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 PLCB1Q9NQ66 1216 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 C2orf42Q9NWW7 574 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 CEP72Q9P209 647 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 CNTN3Q9P232 1028 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 CGNQ9P2M7 1197 aaKnown RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 DNMT3BQ9UBC3 853 aaKnown RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 MYO6Q9UM54 1294 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 TBX20Q9UMR3 447 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 REXO2Q9Y3B8 237 aaKnown RBP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 DAAM1Q9Y4D1 1078 aa9.26□□□□□ -0.93
HDAC1-202ENST00000428704 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 SF3B1O75533 1304 aaKnown RBP eCLIP9.26□□□□□ -0.93
HDAC1-202ENST00000428704 LAMA1P25391 3075 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 ADAMTS20P59510 1910 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 LNP1A1A4G5 178 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 GTPBP10A4D1E9 387 aaKnown RBP9.25□□□□□ -0.93
HDAC1-202ENST00000428704 H0YCG3 227 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 PES1O00541 588 aaKnown RBP9.25□□□□□ -0.93
HDAC1-202ENST00000428704 HNRNPDLO14979 420 aaKnown RBP9.25□□□□□ -0.93
HDAC1-202ENST00000428704 AKAP3O75969 853 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 URI1O94763 535 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-202ENST00000428704 CCNYL3P0C7X3 344 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 CXCL8P10145 99 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 TNFSF9P41273 254 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 CASP5P51878 434 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 SIM1P81133 766 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-202ENST00000428704 GTF2BQ00403 316 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 SCAPQ12770 1279 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 ELF2Q15723 593 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 UPP1Q16831 310 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 ASTE1Q2TB18 679 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-202ENST00000428704 CCDC40Q4G0X9 1142 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 TMEM259Q4ZIN3 620 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 ARHGAP29Q52LW3 1261 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 SLC9A9Q8IVB4 645 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 GPR65Q8IYL9 337 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 EHBP1Q8NDI1 1231 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 NEK11Q8NG66 645 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 GOLGA5Q8TBA6 731 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 PIK3R5Q8WYR1 880 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 C18orf25Q96B23 403 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-202ENST00000428704 ACAP3Q96P50 834 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 TCHPQ9BT92 498 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 ZHX3Q9H4I2 956 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 NHEJ1Q9H9Q4 299 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-202ENST00000428704 TRPV5Q9NQA5 729 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 TOPORSQ9NS56 1045 aaPredicted RBP9.25□□□□□ -0.93
HDAC1-202ENST00000428704 EVA1BQ9NVM1 165 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 DMAC2Q9NW81 257 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 AIPL1Q9NZN9 384 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 TUBGCP4Q9UGJ1 667 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 KCNG1Q9UIX4 513 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 MRFAP1Q9Y605 127 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 GREB1Q4ZG55 1949 aa9.25□□□□□ -0.93
HDAC1-202ENST00000428704 F5P12259 2224 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 DOCK6Q96HP0 2047 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 A0A0B4J269 797 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 CCDC163A0A0D9SF12 145 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 SPAARA0A1B0GVQ0 90 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 ANKRD63C9JTQ0 380 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 H0Y626 953 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 I3L4J1 428 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 ZNF263O14978 683 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 CLDN3O15551 220 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 PJA2O43164 708 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 ADAM12O43184 909 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 TGFB1I1O43294 461 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 KRT86O43790 486 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 TADA2AO75478 443 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 NOL4O94818 638 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 RHOBTB1O94844 696 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 TRIM16O95361 564 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 IPO7O95373 1038 aaKnown RBP9.24□□□□□ -0.93
HDAC1-202ENST00000428704 CAPNS1P04632 268 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 ADRB2P07550 413 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 POU2F2P09086 479 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 PLA2G2AP14555 144 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 CEBPBP17676 345 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 SCP2P22307 547 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 FGFR3P22607 806 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 FCARP24071 287 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 NR2F2P24468 414 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 BRCC3P46736 316 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 KLK7P49862 253 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 LIG4P49917 911 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 KPNA1P52294 538 aaPredicted RBP9.24□□□□□ -0.93
HDAC1-202ENST00000428704 YARSP54577 528 aaKnown RBP9.24□□□□□ -0.93
HDAC1-202ENST00000428704 KCNA1Q09470 495 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 KCNH2Q12809 1159 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 ENOX2Q16206 610 aaKnown RBP9.24□□□□□ -0.93
HDAC1-202ENST00000428704 PLK5Q496M5 336 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 DGKKQ5KSL6 1271 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 FAM171A1Q5VUB5 890 aa9.24□□□□□ -0.93
HDAC1-202ENST00000428704 DPY19L2P1Q6NXN4 242 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms