RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 GOLGA8NF8WBI6 632 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 MTA2O94776 668 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 MYBL1P10243 752 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 PAX3P23760 479 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 MTHFRP42898 656 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 GKAP1Q5VSY0 366 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ANKS6Q68DC2 871 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 SRRM1Q8IYB3 904 aaKnown RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 PPFIBP2Q8ND30 876 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 UHMK1Q8TAS1 419 aaKnown RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 IGDCC4Q8TDY8 1250 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 LPPQ93052 612 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TRAIPQ9BWF2 469 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ATP13A1Q9HD20 1204 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 PKD2L2Q9NZM6 624 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 APPL1Q9UKG1 709 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 RCOR1Q9UKL0 485 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 HEATR9A2RTY3 570 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 AP3B1O00203 1094 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 CCL16O15467 120 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 RGS16O15492 202 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 CYP26A1O43174 497 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TEX33O43247 280 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ERVK-21P61565 698 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 POLR2LP62875 67 aaKnown RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ATP2C1P98194 919 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 IL1RL1Q01638 556 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 OCRLQ01968 901 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 FOXD4Q12950 439 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 GRIK3Q13003 919 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 CATSPER3Q86XQ3 398 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ANKRD42Q8N9B4 389 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 DIS3LQ8TF46 1054 aaKnown RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 SMARCD1Q96GM5 515 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ASB2Q96Q27 587 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 C2orf49Q9BVC5 232 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 OXCT2Q9BYC2 517 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 ALDH8A1Q9H2A2 487 aaPredicted RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 FAM105AQ9NUU6 356 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 TBC1D14Q9P2M4 693 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 GNEQ9Y223 722 aaKnown RBP7.53□□□□□ -1.2
CNOT4-206ENST00000428680 GIT1Q9Y2X7 761 aa7.53□□□□□ -1.2
CNOT4-206ENST00000428680 RLFQ13129 1914 aa7.52□□□□□ -1.2
CNOT4-206ENST00000428680 SCAMP3O14828 347 aaKnown RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 PSMD3O43242 534 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 USP17L7P0C7H9 530 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 SNHG28P0DPA3 235 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 TROVE2P10155 538 aaKnown RBP eCLIP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 TMEM240Q5SV17 173 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 DCLRE1AQ6PJP8 1040 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 TMEM86AQ8N2M4 240 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 ZNF579Q8NAF0 562 aaKnown RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 ZNF384Q8TF68 577 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 HLA-CQ95604 372 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 NECTIN4Q96NY8 510 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CCSER1Q9C0I3 900 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 RAD18Q9NS91 495 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 TRMT13Q9NUP7 481 aaKnown RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 MAD2L2Q9UI95 211 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 VPS51Q9UID3 782 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 MAN1B1Q9UKM7 699 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 IGSF6O95976 241 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 DARSP14868 501 aaKnown RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 PTPN2P17706 415 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 PBLDP30039 288 aaPredicted RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CCR1P32246 355 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 STX2P32856 288 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 ATP6V1E1P36543 226 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 TKTL1P51854 596 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 TROAPQ12815 778 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 XRCC4Q13426 336 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CAMK2GQ13555 558 aaPredicted RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CCL14Q16627 93 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CCSAPQ6IQ19 270 aaPredicted RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 RTL10Q7L3V2 364 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 C11orf96Q7Z7L8 435 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 ZC3H18Q86VM9 953 aaKnown RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 NRSN1Q8IZ57 195 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 PPHLN1Q8NEY8 458 aaKnown RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CXorf40AQ8TE69 158 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 SETD7Q8WTS6 366 aaKnown RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 PYROXD1Q8WU10 500 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 IL12RB2Q99665 862 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 MYOCQ99972 504 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 FAM129AQ9BZQ8 928 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CAPN10Q9HC96 672 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 TMEM8AQ9HCN3 771 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CACNA2D2Q9NY47 1150 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 ITGA11Q9UKX5 1188 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 DAAM1Q9Y4D1 1078 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 LRRC37A2A6NM11 1700 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 OR6C75A6NL08 312 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 KPNA7A9QM74 516 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.52□□□□□ -1.21
CNOT4-206ENST00000428680 RBAK-RBAKDNI3L0D1 243 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 MTSS1O43312 755 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 ANP32DO95626 131 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 CXCL10P02778 98 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 TNNI3P19429 210 aa7.52□□□□□ -1.21
CNOT4-206ENST00000428680 KELP23276 732 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms