RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 CHD9Q3L8U1 2897 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 VWA8A3KMH1 1905 aa8.32□□□□□ -1.08
HMGA1P4-201ENST00000428643 A0A0U1RQJ8 604 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 GOLGA6L9A6NEM1 432 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 USP27XA6NNY8 438 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 TMEM110-MUSTN1A8MSY1 372 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 CCL16O15467 120 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 KRT86O43790 486 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 GRAP2O75791 330 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 GABBR2O75899 941 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 CYP1A2P05177 515 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 CSH1P0DML2 217 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 CSH2P0DML3 217 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 SRGAP2BP0DMP2 458 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 KRT3P12035 628 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 IGFBP4P22692 258 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 MSNP26038 577 aaKnown RBP8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 YWHAQP27348 245 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 GABRB2P47870 512 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 RPL34P49207 117 aaKnown RBP8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 RNASE9P60153 205 aaKnown RBP8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 USP46P62068 366 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 RBM10P98175 930 aaKnown RBP8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 SLC6A3Q01959 620 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 MAMLD1Q13495 774 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 MTMR3Q13615 1198 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 GRIN2CQ14957 1233 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 TCEAL5Q5H9L2 206 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 RAB41Q5JT25 222 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 DCUN1D2Q6PH85 259 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 LILRA6Q6PI73 481 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 OLFML1Q6UWY5 402 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 ITIH5Q86UX2 942 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 MICALL1Q8N3F8 863 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 ZNF564Q8TBZ8 553 aaPredicted RBP8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 KIAA1524Q8TCG1 905 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 CLEC4CQ8WTT0 213 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 SLC22A17Q8WUG5 538 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 ATRIPQ8WXE1 791 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 NDRG1Q92597 394 aaKnown RBP8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 CASP10Q92851 521 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 MCRS1Q96EZ8 462 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 PIWIL1Q96J94 861 aaKnown RBP8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 CEP295NLQ96MC4 621 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 ZNF512Q96ME7 567 aaPredicted RBP8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 SLITRK1Q96PX8 696 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 CDCA3Q99618 268 aaPredicted RBP8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 LACRTQ9GZZ8 138 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 PLEKHA4Q9H4M7 779 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 MRPL47Q9HD33 250 aaKnown RBP8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 DZANK1Q9NVP4 752 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 EHD2Q9NZN4 543 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 GMIPQ9P107 970 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 UVRAGQ9P2Y5 699 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 HCFC2Q9Y5Z7 792 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 GBF1Q92538 1859 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 PLXNA4Q9HCM2 1894 aa8.31□□□□□ -1.08
HMGA1P4-201ENST00000428643 NLRC5Q86WI3 1866 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 A0A1W2PQH9 124 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 TNFRSF10BO14763 440 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 PJA2O43164 708 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 BUB1O43683 1085 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 HSF2BPO75031 334 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 XYLBO75191 536 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 DAB1O75553 588 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 RFPL2O75678 378 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 ZMYND10O75800 440 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 C1RP00736 705 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 HNRNPA1P09651 372 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 DESP17661 470 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 GTF2F1P35269 517 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 SCNN1AP37088 669 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 ARHGAP25P42331 645 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 GSCP56915 257 aaPredicted RBP8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 DAOAP59103 153 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 YWHAGP61981 247 aaKnown RBP eCLIP8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 MRPS5P82675 430 aaKnown RBP8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 HYAL1Q12794 435 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 ZNF268Q14587 947 aaPredicted RBP8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 TAF5Q15542 800 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 IFI16Q16666 785 aaKnown RBP8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 EFHC1Q5JVL4 640 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 PLEKHA7Q6IQ23 1121 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 RSRC2Q7L4I2 434 aaKnown RBP8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 SLC26A9Q7LBE3 791 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 ZSCAN30Q86W11 494 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 RHOT2Q8IXI1 618 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 ARHGAP18Q8N392 663 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 EMC1Q8N766 993 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 SLC35G2Q8TBE7 412 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 IRGQQ8WZA9 623 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 PSMG2Q969U7 264 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 GCNAQ96QF7 691 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 GAS2L1Q99501 681 aaPredicted RBP8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 TRIM62Q9BVG3 475 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 SFXN1Q9H9B4 322 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 OSGEPQ9NPF4 335 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 ASAH2Q9NR71 780 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 ZDHHC7Q9NXF8 308 aa8.3□□□□□ -1.08
HMGA1P4-201ENST00000428643 ANAPC7Q9UJX3 599 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms