RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 MBL2P11226 248 aaPredicted RBP16.48■□□□□ 0.23
SEC13-210ENST00000428626 CCDC130P13994 396 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 YWHAQP27348 245 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 PDE6CP51160 858 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 SLC5A3P53794 718 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 NR1H3Q13133 447 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 PLK5Q496M5 336 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 C2orf27AQ580R0 203 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 SV2AQ7L0J3 742 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 FBXO32Q969P5 355 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 ZC3H10Q96K80 434 aaKnown RBP16.48■□□□□ 0.23
SEC13-210ENST00000428626 SLITRK1Q96PX8 696 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 DUSP15Q9H1R2 295 aaPredicted RBP16.48■□□□□ 0.23
SEC13-210ENST00000428626 CCSER2Q9H7U1 834 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.48■□□□□ 0.237e-6■■■■■ 74.5
SEC13-210ENST00000428626 EHD2Q9NZN4 543 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 GMIPQ9P107 970 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 CHD8Q9HCK8 2581 aa16.48■□□□□ 0.23
SEC13-210ENST00000428626 MYH10P35580 1976 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 FAM237AA0A1B0GTK4 181 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 FAM92AA1XBS5 289 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 RPN1P04843 607 aaKnown RBP16.47■□□□□ 0.23
SEC13-210ENST00000428626 ZDHHC11BP0C7U3 371 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 ASPAP45381 313 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 NDUFA8P51970 172 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 NDST1P52848 882 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 AP3M2P53677 418 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 PLA2G2CQ5R387 149 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 C12orf29Q8N999 325 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 TMC2Q8TDI7 906 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 LOXL4Q96JB6 756 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 TWNKQ96RR1 684 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 MED10Q9BTT4 135 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 GOLPH3LQ9H4A5 285 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 KRT82Q9NSB4 513 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 EBF1Q9UH73 591 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 INVSQ9Y283 1065 aa16.47■□□□□ 0.23
SEC13-210ENST00000428626 AP1G2O75843 785 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 AKAP3O75969 853 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 RTN3O95197 1032 aaPredicted RBP16.46■□□□□ 0.23
SEC13-210ENST00000428626 APBB3O95704 486 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 ASS1P00966 412 aaKnown RBP16.46■□□□□ 0.23
SEC13-210ENST00000428626 HLA-DRAP01903 254 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 ZNF806P0C7X5 589 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 EMC10Q5UCC4 262 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 SNX30Q5VWJ9 437 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 CEP135Q66GS9 1140 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 TCEAL6Q6IPX3 200 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 GPRIN1Q7Z2K8 1008 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 CRYBG2Q8N1P7 616 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 PHTF2Q8N3S3 785 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 CCDC33Q8N5R6 958 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 KIAA1958Q8N8K9 716 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 SLC2A14Q8TDB8 520 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 TCEAL3Q969E4 200 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 ACDQ96AP0 544 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 TNIP3Q96KP6 325 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 SPATA32Q96LK8 384 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 TPSD1Q9BZJ3 242 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 APOBEC3GQ9HC16 384 aaKnown RBP16.46■□□□□ 0.23
SEC13-210ENST00000428626 DMAP1Q9NPF5 467 aaPredicted RBP16.46■□□□□ 0.23
SEC13-210ENST00000428626 ZDHHC4Q9NPG8 344 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 FAM49BQ9NUQ9 324 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 MAPK8IP1Q9UQF2 711 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 TRAF3IP3Q9Y228 551 aa16.46■□□□□ 0.23
SEC13-210ENST00000428626 RHOBTB3O94955 611 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 CLSTN1O94985 981 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 TRIM49P0CI25 452 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 TRIM49CP0CI26 452 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 PPP3CAQ08209 521 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 DPYDQ12882 1025 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 SGSM1Q2NKQ1 1148 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 PPM1JQ5JR12 505 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 LY6G5CQ5SRR4 150 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 TMEM92Q6UXU6 159 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 RASSF3Q86WH2 238 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 OVCA2Q8WZ82 227 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 EXOC4Q96A65 974 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 SMARCD1Q96GM5 515 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 CNTNAP3BQ96NU0 1288 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 CNTNAP3Q9BZ76 1288 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 CSNK1G1Q9HCP0 422 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 USP25Q9UHP3 1055 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 GON4LQ3T8J9 2241 aa16.45■□□□□ 0.22
SEC13-210ENST00000428626 CACNA1BQ00975 2339 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 E2F8A0AVK6 867 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 HHLA1C9JL84 531 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 TM4SF5O14894 197 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 IKBKBO14920 756 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 GREM1O60565 184 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 TBX18O95935 607 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 BCKDHBP21953 392 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 MPLP40238 635 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 SYKP43405 635 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 KIR2DL1P43626 348 aaPredicted RBP16.44■□□□□ 0.22
SEC13-210ENST00000428626 DGKEP52429 567 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 MAP3K7CLP57077 242 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 KDSRQ06136 332 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 HECTD3Q5T447 861 aa16.44■□□□□ 0.22
SEC13-210ENST00000428626 BBS7Q8IWZ6 715 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms