RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 ARHGEF19Q8IW93 802 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 C4orf19Q8IY42 314 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 GPR152Q8TDT2 470 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 DNAJC7Q99615 494 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 FAM167BQ9BTA0 163 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 HOXA2O43364 376 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 COILP38432 576 aaPredicted RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 POU4F1Q01851 419 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 KRT72Q14CN4 511 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 GALNTL6Q49A17 601 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 TSPAN17Q96FV3 270 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 C17orf80Q9BSJ5 609 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 C2orf81A6NN90 581 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 SH3BGRLO75368 114 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 RPL10AP62906 217 aaKnown RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 OTUD4Q01804 1114 aaKnown RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 CDC16Q13042 620 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 OTOP1Q7RTM1 612 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 OOSP2Q86WS3 158 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 RSPH1Q8WYR4 309 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 ABTB1Q969K4 478 aaPredicted RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 TRIM45Q9H8W5 580 aaPredicted RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 CERS4Q9HA82 394 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 PSMC3IPQ9P2W1 217 aaPredicted RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 TRMT6Q9UJA5 497 aaKnown RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 RNASEH1O60930 286 aaKnown RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 ITIH2P19823 946 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 HNRNPH2P55795 449 aaKnown RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 PTPN11Q06124 597 aaPredicted RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 OVGP1Q12889 678 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 CHI3L2Q15782 390 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 SDHAF4Q5VUM1 108 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 NOA1Q8NC60 698 aaKnown RBP10.08□□□□□ -0.8
SNX13-203ENST00000428135 MDM1Q8TC05 714 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 BTN2A2Q8WVV5 523 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 ANKS1AQ92625 1134 aa10.08□□□□□ -0.8
SNX13-203ENST00000428135 AMHP03971 560 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 SPRP35270 261 aaPredicted RBP10.07□□□□□ -0.8
SNX13-203ENST00000428135 AARS2Q5JTZ9 985 aaKnown RBP10.07□□□□□ -0.8
SNX13-203ENST00000428135 ERAP2Q6P179 960 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 CCDC60Q8IWA6 550 aaPredicted RBP10.07□□□□□ -0.8
SNX13-203ENST00000428135 SLC2A14Q8TDB8 520 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 UCMAQ8WVF2 138 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 ANKRD63C9JTQ0 380 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 MICAL2O94851 1124 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 GUCA1CO95843 209 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 MT-CO1P00395 513 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 LHX1P48742 406 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 WASHC5Q12768 1159 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 STARD3Q14849 445 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 NAPEPLDQ6IQ20 393 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 LPCAT1Q8NF37 534 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 SOCS4Q8WXH5 440 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 STAMBPL1Q96FJ0 436 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 C10orf88Q9H8K7 445 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 SELENONQ9NZV5 590 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 PYGLP06737 847 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 MCF2P10911 925 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 RAP1GDS1P52306 607 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 WDR49Q8IV35 697 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 TLR8Q9NR97 1041 aaKnown RBP10.07□□□□□ -0.8
SNX13-203ENST00000428135 SCOCQ9UIL1 159 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 RNF112Q9ULX5 631 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 RUVBL2Q9Y230 463 aaKnown RBP10.07□□□□□ -0.8
SNX13-203ENST00000428135 NFKBIEO00221 500 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 CYTH3O43739 400 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 RECQL4O94761 1208 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 EGFRP00533 1210 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 POU6F1Q14863 301 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 EML3Q32P44 896 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 PPM1LQ5SGD2 360 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 CES3Q6UWW8 571 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 GPR142Q7Z601 462 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 KIAA0319LQ8IZA0 1049 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 PCDHB5Q9Y5E4 795 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 NR2E3Q9Y5X4 410 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 CDY2AQ9Y6F7 541 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 STRNO43815 780 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 ALDH1A2O94788 518 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 LUC7L3O95232 432 aaKnown RBP10.07□□□□□ -0.8
SNX13-203ENST00000428135 PCNAP12004 261 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 UBE3AQ05086 875 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 SLC29A2Q14542 456 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 C11orf63Q6NUN7 778 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 ZNF677Q86XU0 584 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 LRRN4Q8WUT4 740 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 SPATA16Q9BXB7 569 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 VPS33BQ9H267 617 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 MFSD1Q9H3U5 465 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 PKD2L2Q9NZM6 624 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 FBXO10Q9UK96 956 aa10.07□□□□□ -0.8
SNX13-203ENST00000428135 TRIM49D1C9J1S8 452 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 GOLGA8TH3BQL2 631 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 UBA1P22314 1058 aaKnown RBP10.06□□□□□ -0.8
SNX13-203ENST00000428135 OR1E1P30953 314 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 DMC1Q14565 340 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 KIAA0895Q8NCT3 520 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 TINF2Q9BSI4 451 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 TEX12Q9BXU0 123 aa10.06□□□□□ -0.8
SNX13-203ENST00000428135 CHCHD3Q9NX63 227 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms