RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 SUZ12Q15022 739 aaKnown RBP12.76□□□□□ -0.37
DDX39B-208ENST00000428098 NFE2Q16621 373 aaPredicted RBP12.76□□□□□ -0.37
DDX39B-208ENST00000428098 C6orf118Q5T5N4 469 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 DCAF12L1Q5VU92 463 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 RINT1Q6NUQ1 792 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 IL27RAQ6UWB1 636 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 USP49Q70CQ1 688 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 KIAA1958Q8N8K9 716 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 FSIP1Q8NA03 581 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 LEO1Q8WVC0 666 aaPredicted RBP12.76□□□□□ -0.37
DDX39B-208ENST00000428098 SPIRE2Q8WWL2 714 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 BAP1Q92560 729 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 TSPAN18Q96SJ8 248 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 GABRG3Q99928 467 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 NRSN2Q9GZP1 204 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 RPF1Q9H9Y2 349 aaKnown RBP12.76□□□□□ -0.37
DDX39B-208ENST00000428098 ZSWIM6Q9HCJ5 1215 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 ABCB6Q9NP58 842 aa12.76□□□□□ -0.37
DDX39B-208ENST00000428098 DDX19AQ9NUU7 478 aaKnown RBP12.76□□□□□ -0.37
DDX39B-208ENST00000428098 EIF2B4Q9UI10 523 aaKnown RBP12.76□□□□□ -0.37
DDX39B-208ENST00000428098 ZNF840PA6NDX5 716 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 KPNA7A9QM74 516 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-208ENST00000428098 CBX4O00257 560 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 SLC9A3R1O14745 358 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-208ENST00000428098 ADH1CP00326 375 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 PSMA5P28066 241 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 TAF6P49848 677 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 SF3A1Q15459 793 aaKnown RBP12.75□□□□□ -0.37
DDX39B-208ENST00000428098 PREPLQ4J6C6 727 aaPredicted RBP12.75□□□□□ -0.37
DDX39B-208ENST00000428098 PKDCCQ504Y2 493 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 KCNT1Q5JUK3 1230 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 KIAA1324Q6UXG2 1013 aaKnown RBP12.75□□□□□ -0.37
DDX39B-208ENST00000428098 TRMT11Q7Z4G4 463 aaKnown RBP12.75□□□□□ -0.37
DDX39B-208ENST00000428098 ERICH1Q86X53 443 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 TMEM25Q86YD3 366 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 SCN4BQ8IWT1 228 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 CHPFQ8IZ52 775 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 PDCL2Q8N4E4 241 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 TERB1Q8NA31 727 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 CADM4Q8NFZ8 388 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 TTC9Q92623 222 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 TMEM176AQ96HP8 235 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 CPNE5Q9HCH3 593 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 ITM2CQ9NQX7 267 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 DEC1Q9P2X7 70 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 IL17BQ9UHF5 180 aa12.75□□□□□ -0.37
DDX39B-208ENST00000428098 CPSF3Q9UKF6 684 aaKnown RBP12.75□□□□□ -0.37
DDX39B-208ENST00000428098 PRRT4C9JH25 899 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 OGTO15294 1046 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 ZBTB24O43167 697 aaPredicted RBP12.74□□□□□ -0.37
DDX39B-208ENST00000428098 BRINP1O60477 761 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 OLFM2O95897 454 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 CDC25AP30304 524 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 GRK6P43250 576 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 TSPY1Q01534 308 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 RHDQ02161 417 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 GAD2Q05329 585 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 RAD51AP2Q09MP3 1159 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 TMEM132DQ14C87 1099 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 ARHGAP40Q5TG30 622 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 KCNK18Q7Z418 384 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 METTL3Q86U44 580 aaKnown RBP12.74□□□□□ -0.37
DDX39B-208ENST00000428098 WBP2Q969T9 261 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 DRC1Q96MC2 740 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 ACBD6Q9BR61 282 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 C17orf75Q9HAS0 396 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 DPP3Q9NY33 737 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 ORC3Q9UBD5 711 aaPredicted RBP12.74□□□□□ -0.37
DDX39B-208ENST00000428098 MYLKQ15746 1914 aa12.74□□□□□ -0.37
DDX39B-208ENST00000428098 A0A0B4J269 797 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 H0Y8X5 98 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 TRAK2O60296 914 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 PCDHGA12O60330 932 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 ATP2C2O75185 946 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 PFKLP17858 780 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 DNAJC3Q13217 504 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 ZNF174Q15697 407 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 CFAP221Q4G0U5 840 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 BMP2KLQ5H9B9 411 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 INTS6LQ5JSJ4 861 aaKnown RBP12.73□□□□□ -0.37
DDX39B-208ENST00000428098 SDE2Q6IQ49 451 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 OSTM1Q86WC4 334 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 ZFRQ96KR1 1074 aaKnown RBP12.73□□□□□ -0.37
DDX39B-208ENST00000428098 TRIM9Q9C026 710 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 TRIM4Q9C037 500 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 MKRN2Q9H000 416 aaKnown RBP12.73□□□□□ -0.37
DDX39B-208ENST00000428098 DDX43Q9NXZ2 648 aaKnown RBP12.73□□□□□ -0.37
DDX39B-208ENST00000428098 TRPM5Q9NZQ8 1165 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 USP36Q9P275 1121 aaKnown RBP12.73□□□□□ -0.37
DDX39B-208ENST00000428098 L1RE1Q9UN81 338 aa12.73□□□□□ -0.37
DDX39B-208ENST00000428098 TMEM131Q92545 1883 aa12.72□□□□□ -0.37
DDX39B-208ENST00000428098 AHCTF1Q8WYP5 2266 aa12.72□□□□□ -0.37
DDX39B-208ENST00000428098 HOXC11O43248 304 aaPredicted RBP12.72□□□□□ -0.37
DDX39B-208ENST00000428098 OAS1P00973 400 aaKnown RBP12.72□□□□□ -0.37
DDX39B-208ENST00000428098 NTRK1P04629 796 aa12.72□□□□□ -0.37
DDX39B-208ENST00000428098 PLS3P13797 630 aa12.72□□□□□ -0.37
DDX39B-208ENST00000428098 GRIK1P39086 918 aa12.72□□□□□ -0.37
DDX39B-208ENST00000428098 PDE6CP51160 858 aa12.72□□□□□ -0.37
DDX39B-208ENST00000428098 TPMTP51580 245 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms