RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 NELL1Q92832 810 aa20.29■□□□□ 0.84
COL9A2-204ENST00000427563 FAXDC2Q96IV6 333 aa20.29■□□□□ 0.84
COL9A2-204ENST00000427563 SLITRK1Q96PX8 696 aa20.29■□□□□ 0.84
COL9A2-204ENST00000427563 KIAA1468Q9P260 1216 aa20.29■□□□□ 0.84
COL9A2-204ENST00000427563 FBXO4Q9UKT5 387 aa20.29■□□□□ 0.84
COL9A2-204ENST00000427563 CPQQ9Y646 472 aa20.29■□□□□ 0.84
COL9A2-204ENST00000427563 COCHO43405 550 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 ABL1P00519 1130 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 FAM200BP0CF97 657 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 PPP1R2P41236 205 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 FMO5P49326 533 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 CSTF1Q05048 431 aaKnown RBP20.28■□□□□ 0.84
COL9A2-204ENST00000427563 PDGFRLQ15198 375 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 GAB4Q2WGN9 574 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 FSTL4Q6MZW2 842 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 LMO3Q8TAP4 145 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 OVCA2Q8WZ82 227 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 CCSER2Q9H7U1 834 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 ECT2Q9H8V3 914 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 OSER1Q9NX31 292 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 DUS2Q9NX74 493 aaKnown RBP20.28■□□□□ 0.84
COL9A2-204ENST00000427563 SMPD4Q9NXE4 827 aa20.28■□□□□ 0.84
COL9A2-204ENST00000427563 SCAMP3O14828 347 aaKnown RBP20.27■□□□□ 0.84
COL9A2-204ENST00000427563 SATB1Q01826 763 aa20.27■□□□□ 0.84
COL9A2-204ENST00000427563 ZNF528Q3MIS6 628 aa20.27■□□□□ 0.84
COL9A2-204ENST00000427563 TMEM196Q5HYL7 178 aa20.27■□□□□ 0.84
COL9A2-204ENST00000427563 CC2D1AQ6P1N0 951 aaPredicted RBP20.27■□□□□ 0.84
COL9A2-204ENST00000427563 PKN3Q6P5Z2 889 aa20.27■□□□□ 0.84
COL9A2-204ENST00000427563 C1orf228Q6PIY5 440 aa20.27■□□□□ 0.84
COL9A2-204ENST00000427563 MAMSTRQ6ZN01 415 aa20.27■□□□□ 0.84
COL9A2-204ENST00000427563 CCDC150Q8NCX0 1101 aa20.27■□□□□ 0.84
COL9A2-204ENST00000427563 EZH1Q92800 747 aaPredicted RBP20.27■□□□□ 0.84
COL9A2-204ENST00000427563 WBP2Q969T9 261 aa20.27■□□□□ 0.84
COL9A2-204ENST00000427563 METTL14Q9HCE5 456 aaKnown RBP20.27■□□□□ 0.84
COL9A2-204ENST00000427563 COMMD8Q9NX08 183 aa20.27■□□□□ 0.84
COL9A2-204ENST00000427563 PMM2O15305 246 aa20.26■□□□□ 0.83
COL9A2-204ENST00000427563 GJA4P35212 333 aa20.26■□□□□ 0.83
COL9A2-204ENST00000427563 PAK1Q13153 545 aa20.26■□□□□ 0.83
COL9A2-204ENST00000427563 CUL2Q13617 745 aa20.26■□□□□ 0.83
COL9A2-204ENST00000427563 PDZD8Q8NEN9 1154 aa20.26■□□□□ 0.83
COL9A2-204ENST00000427563 JAKMIP2Q96AA8 810 aa20.26■□□□□ 0.83
COL9A2-204ENST00000427563 TMEM176AQ96HP8 235 aa20.26■□□□□ 0.83
COL9A2-204ENST00000427563 NMUR1Q9HB89 426 aa20.26■□□□□ 0.83
COL9A2-204ENST00000427563 CFAP54Q96N23 3096 aa20.26■□□□□ 0.83
COL9A2-204ENST00000427563 TRDMT1O14717 391 aaKnown RBP20.25■□□□□ 0.83
COL9A2-204ENST00000427563 CYP26A1O43174 497 aa20.25■□□□□ 0.83
COL9A2-204ENST00000427563 MBL2P11226 248 aaPredicted RBP20.25■□□□□ 0.83
COL9A2-204ENST00000427563 IFNAR2P48551 515 aa20.25■□□□□ 0.83
COL9A2-204ENST00000427563 PDE6CP51160 858 aa20.25■□□□□ 0.83
COL9A2-204ENST00000427563 LRMPQ12912 555 aa20.25■□□□□ 0.83
COL9A2-204ENST00000427563 CCDC40Q4G0X9 1142 aa20.25■□□□□ 0.83
COL9A2-204ENST00000427563 TRIM59Q8IWR1 403 aa20.25■□□□□ 0.83
COL9A2-204ENST00000427563 TRIML1Q8N9V2 468 aa20.25■□□□□ 0.83
COL9A2-204ENST00000427563 KAT5Q92993 513 aa20.25■□□□□ 0.83
COL9A2-204ENST00000427563 NKD2Q969F2 451 aaPredicted RBP20.25■□□□□ 0.83
COL9A2-204ENST00000427563 DUSP16Q9BY84 665 aa20.25■□□□□ 0.83
COL9A2-204ENST00000427563 RIF1Q5UIP0 2472 aaKnown RBP20.25■□□□□ 0.83
COL9A2-204ENST00000427563 BICDL2A1A5D9 508 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 ANTXRLA6NF34 631 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 TBX18O95935 607 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 EGFP01133 1207 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 TUBP50607 506 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 GALK1P51570 392 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 KIF11P52732 1056 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 MARSP56192 900 aaKnown RBP20.24■□□□□ 0.83
COL9A2-204ENST00000427563 DMWDQ09019 674 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 LRRC32Q14392 662 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 DGKKQ5KSL6 1271 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 HECTD3Q5T447 861 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 ARHGAP17Q68EM7 881 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 CLEC17AQ6ZS10 378 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 TTC30AQ86WT1 665 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 ZBTB44Q8NCP5 570 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 ATP2A3Q93084 1043 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 HEXIM2Q96MH2 286 aaKnown RBP20.24■□□□□ 0.83
COL9A2-204ENST00000427563 IER2Q9BTL4 223 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 SRRTQ9BXP5 876 aaKnown RBP20.24■□□□□ 0.83
COL9A2-204ENST00000427563 PNPLA8Q9NP80 782 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 CFAP97Q9P2B7 532 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 SCML2Q9UQR0 700 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 FAM186AA6NE01 2351 aa20.24■□□□□ 0.83
COL9A2-204ENST00000427563 K7ESF4 209 aa20.23■□□□□ 0.83
COL9A2-204ENST00000427563 LILRB5O75023 590 aa20.23■□□□□ 0.83
COL9A2-204ENST00000427563 ACO1P21399 889 aaKnown RBP20.23■□□□□ 0.83
COL9A2-204ENST00000427563 SCD5Q86SK9 330 aa20.23■□□□□ 0.83
COL9A2-204ENST00000427563 SPEM1Q8N4L4 309 aa20.23■□□□□ 0.83
COL9A2-204ENST00000427563 CPA6Q8N4T0 437 aa20.23■□□□□ 0.83
COL9A2-204ENST00000427563 CLSTN2Q9H4D0 955 aa20.23■□□□□ 0.83
COL9A2-204ENST00000427563 FBXO44Q9H4M3 255 aa20.23■□□□□ 0.83
COL9A2-204ENST00000427563 POLR3BQ9NW08 1133 aaPredicted RBP20.23■□□□□ 0.83
COL9A2-204ENST00000427563 USP3Q9Y6I4 520 aa20.23■□□□□ 0.83
COL9A2-204ENST00000427563 A0A1W2PQH9 124 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 TULP2O00295 520 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 GREM1O60565 184 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 CYP17A1P05093 508 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 OPRD1P41143 372 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 MESP2Q0VG99 397 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 IRF2BP1Q8IU81 584 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 ARHGEF19Q8IW93 802 aa20.22■□□□□ 0.83
COL9A2-204ENST00000427563 ADGRG2Q8IZP9 1017 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms