RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 PSD3Q9NYI0 1048 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 DIP2CQ9Y2E4 1556 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 TFE3P19532 575 aaPredicted RBP13.62□□□□□ -0.23
SPG11-202ENST00000427534 HSPA9P38646 679 aaKnown RBP13.62□□□□□ -0.23
SPG11-202ENST00000427534 PSMC6P62333 389 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 VSNL1P62760 191 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 TP53BP2Q13625 1128 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 HIC1Q14526 733 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 MTHFD1LQ6UB35 978 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 ZFPM1Q8IX07 1006 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 C10orf88Q9H8K7 445 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 MYPNQ86TC9 1320 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 SCAMP1O15126 338 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 RAD51CO43502 376 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 ACADSBP45954 432 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 HERVK_113P62684 666 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 TSPAN17Q96FV3 270 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 NDE1Q9NXR1 346 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 UBQLN1Q9UMX0 589 aaKnown RBP13.62□□□□□ -0.23
SPG11-202ENST00000427534 XPO1O14980 1071 aaKnown RBP13.62□□□□□ -0.23
SPG11-202ENST00000427534 RPS12P25398 132 aaKnown RBP13.62□□□□□ -0.23
SPG11-202ENST00000427534 BNIPLQ7Z465 357 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 RNF168Q8IYW5 571 aaPredicted RBP13.62□□□□□ -0.23
SPG11-202ENST00000427534 TC2NQ8N9U0 490 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 UCMAQ8WVF2 138 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 MRPL1Q9BYD6 325 aaKnown RBP13.62□□□□□ -0.23
SPG11-202ENST00000427534 CAAP1Q9H8G2 361 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 TRPC4Q9UBN4 977 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 PRKAB1Q9Y478 270 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 DIP2AQ14689 1571 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 NPTX2P47972 431 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 POU6F1Q14863 301 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 FBXW10Q5XX13 1052 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 AGBL3Q8NEM8 1001 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 PIK3R5Q8WYR1 880 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 ACOX2Q99424 681 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 PACSIN1Q9BY11 444 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 SPATC1LQ9H0A9 340 aa13.62□□□□□ -0.23
SPG11-202ENST00000427534 VWA5AO00534 786 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 WBP4O75554 376 aaKnown RBP13.61□□□□□ -0.23
SPG11-202ENST00000427534 RBP3P10745 1247 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 ADIGQ0VDE8 80 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 ZNF284Q2VY69 593 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 EXO5Q9H790 373 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 CCNT2O60583 730 aaKnown RBP13.61□□□□□ -0.23
SPG11-202ENST00000427534 EIF2S1P05198 315 aaKnown RBP13.61□□□□□ -0.23
SPG11-202ENST00000427534 MPZL3Q6UWV2 235 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 CXCL17Q6UXB2 119 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 NAT16Q8N8M0 369 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 NETO2Q8NC67 525 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 NACC2Q96BF6 587 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 H3BRB1 525 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 MLH1P40692 756 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 RABGAP1LQ5R372 815 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 CYP4X1Q8N118 509 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 MROH8Q9H579 483 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 SNCAIPQ9Y6H5 919 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 WDR47O94967 919 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 FXR2P51116 673 aaKnown RBP eCLIP13.61□□□□□ -0.235e-7■■□□□ 11.7
SPG11-202ENST00000427534 RAD9BQ6WBX8 426 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 SLFN11Q7Z7L1 901 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 FAM129AQ9BZQ8 928 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 AGPAT3Q9NRZ7 376 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 RPS6KB2Q9UBS0 482 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 ZMYM5Q9UJ78 669 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 TTC39BQ5VTQ0 682 aaPredicted RBP13.61□□□□□ -0.23
SPG11-202ENST00000427534 EMID1Q96A84 441 aaPredicted RBP13.61□□□□□ -0.23
SPG11-202ENST00000427534 GEMIN8Q9NWZ8 242 aaKnown RBP13.61□□□□□ -0.23
SPG11-202ENST00000427534 HES2Q9Y543 173 aa13.61□□□□□ -0.23
SPG11-202ENST00000427534 MYO1CO00159 1063 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 KPNA3O00505 521 aaPredicted RBP13.6□□□□□ -0.23
SPG11-202ENST00000427534 KCNK10P57789 538 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 PCSK9Q8NBP7 692 aaKnown RBP13.6□□□□□ -0.23
SPG11-202ENST00000427534 CNBD2Q96M20 576 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 CORO1BQ9BR76 489 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 TMEM121Q9BTD3 319 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 DDX28Q9NUL7 540 aaKnown RBP13.6□□□□□ -0.23
SPG11-202ENST00000427534 SLC9A8Q9Y2E8 581 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 ENO2P09104 434 aaPredicted RBP13.6□□□□□ -0.23
SPG11-202ENST00000427534 USP17L7P0C7H9 530 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 BDNFP23560 247 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 DSG3P32926 999 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 ADCK1Q86TW2 530 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 STX19Q8N4C7 294 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 HMX1Q9NP08 348 aaPredicted RBP13.6□□□□□ -0.23
SPG11-202ENST00000427534 UVRAGQ9P2Y5 699 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 POLR1AO95602 1720 aaPredicted RBP13.6□□□□□ -0.23
SPG11-202ENST00000427534 NFICP08651 508 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 MAGEA4P43358 317 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 SLC27A5Q9Y2P5 690 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 JCHAINP01591 159 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 AMHP03971 560 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 SCARA3Q6AZY7 606 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 C11orf63Q6NUN7 778 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 SLC20A1Q8WUM9 679 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 KCNB2Q92953 911 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 PHF21BQ96EK2 531 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 NDUFS2O75306 463 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 CTNNB1P35222 781 aa13.6□□□□□ -0.23
SPG11-202ENST00000427534 C16orf46Q6P387 395 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms