RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 CAVIN3Q969G5 261 aa15.92■□□□□ 0.14
ACTB-204ENST00000425660 MYLPFQ96A32 169 aa15.92■□□□□ 0.14
ACTB-204ENST00000425660 FAM193BQ96PV7 902 aaPredicted RBP15.92■□□□□ 0.14
ACTB-204ENST00000425660 PEBP4Q96S96 227 aa15.92■□□□□ 0.14
ACTB-204ENST00000425660 DDX23Q9BUQ8 820 aaKnown RBP15.92■□□□□ 0.14
ACTB-204ENST00000425660 DCLK3Q9C098 648 aa15.92■□□□□ 0.14
ACTB-204ENST00000425660 PLEKHA4Q9H4M7 779 aa15.92■□□□□ 0.14
ACTB-204ENST00000425660 NRDE2Q9H7Z3 1164 aa15.92■□□□□ 0.14
ACTB-204ENST00000425660 PNPLA8Q9NP80 782 aa15.92■□□□□ 0.14
ACTB-204ENST00000425660 HHLA1C9JL84 531 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 SYN3O14994 580 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 FBXO21O94952 628 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 OR1G1P47890 313 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 CACNA2D1P54289 1103 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 ADCY2Q08462 1091 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 NNTQ13423 1086 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 CASP8Q14790 479 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 TRADDQ15628 312 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 SMTNL2Q2TAL5 461 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 DRICH1Q6PGQ1 229 aaPredicted RBP15.91■□□□□ 0.14
ACTB-204ENST00000425660 FAM172AQ8WUF8 416 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 TEKT4Q8WW24 435 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 TBCBQ99426 244 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 MRPL9Q9BYD2 267 aaKnown RBP15.91■□□□□ 0.14
ACTB-204ENST00000425660 PPP1R12CQ9BZL4 782 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 ZWILCHQ9H900 591 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 LRRC4Q9HBW1 653 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 CNGB3Q9NQW8 809 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 CHST7Q9NS84 486 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 RASAL2Q9UJF2 1139 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 LRFN2Q9ULH4 789 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 NFU1Q9UMS0 254 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 KDELR1P24390 212 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 CYP2C18P33260 490 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 MATKP42679 507 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 ARSEP51690 589 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 HDAC4P56524 1084 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 TSPY1Q01534 308 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 BOLA3Q53S33 107 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 ODF2Q5BJF6 829 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 ZFYVE27Q5T4F4 411 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 LRRTM3Q86VH5 581 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 VSIG1Q86XK7 387 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 CCDC105Q8IYK2 499 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 C1orf54Q8WWF1 131 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 IFT81Q8WYA0 676 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 NT5C3BQ969T7 300 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 ACSF2Q96CM8 615 aaPredicted RBP15.91■□□□□ 0.14
ACTB-204ENST00000425660 KCNK16Q96T55 309 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 VIPAS39Q9H9C1 493 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 PCSK1NQ9UHG2 260 aa15.91■□□□□ 0.14
ACTB-204ENST00000425660 FEZ2Q9UHY8 353 aaPredicted RBP15.91■□□□□ 0.14
ACTB-204ENST00000425660 R3HDM2Q9Y2K5 976 aaKnown RBP15.91■□□□□ 0.14
ACTB-204ENST00000425660 NRP1O14786 923 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 PRPSAP2O60256 369 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 KRT10P13645 584 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 TKTL1P51854 596 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 YWHAZP63104 245 aaKnown RBP15.9■□□□□ 0.14
ACTB-204ENST00000425660 ATP11AP98196 1134 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 CDO1Q16878 200 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 RAB6CQ53S08 254 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 STRADAQ7RTN6 431 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 BNIPLQ7Z465 357 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 SIX6OS1Q8N1H7 587 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 ATG4AQ8WYN0 398 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 VWCEQ96DN2 955 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 TRIM51Q9BSJ1 452 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 RAB6CQ9H0N0 254 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 FAM114A2Q9NRY5 505 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 TMLHEQ9NVH6 421 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.9■□□□□ 0.141e-16■■□□□ 13.4
ACTB-204ENST00000425660 ADAM28Q9UKQ2 775 aa15.9■□□□□ 0.14
ACTB-204ENST00000425660 PRG3Q9Y2Y8 225 aaPredicted RBP15.9■□□□□ 0.14
ACTB-204ENST00000425660 MDM4O15151 490 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 DAPK3O43293 454 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 DAB1O75553 588 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 ECEL1O95672 775 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 RFC2P35250 354 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 KCNJ1P48048 391 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 NDUFV1P49821 464 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 SLC25A52Q3SY17 297 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 SYDE1Q6ZW31 735 aaPredicted RBP15.89■□□□□ 0.13
ACTB-204ENST00000425660 SCML4Q8N228 414 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 SLC2A13Q96QE2 648 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 TMEM209Q96SK2 561 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 TMEM175Q9BSA9 504 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 ADAM33Q9BZ11 813 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 NGRNQ9NPE2 291 aaKnown RBP15.89■□□□□ 0.13
ACTB-204ENST00000425660 DMAP1Q9NPF5 467 aaPredicted RBP15.89■□□□□ 0.13
ACTB-204ENST00000425660 SCN5AQ14524 2016 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 TADA2AO75478 443 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 ALDH2P05091 517 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 CLTBP09497 229 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 TFE3P19532 575 aaPredicted RBP15.89■□□□□ 0.13
ACTB-204ENST00000425660 GATMP50440 423 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 DAOAP59103 153 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 MRPL58Q14197 206 aaKnown RBP15.89■□□□□ 0.13
ACTB-204ENST00000425660 CNKSR3Q6P9H4 555 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 BBS12Q6ZW61 710 aa15.89■□□□□ 0.13
ACTB-204ENST00000425660 GPRIN1Q7Z2K8 1008 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms