RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 UPK3BL2E5RIL1 263 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SGK1O00141 431 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 OAS1P00973 400 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 HOXB2P14652 356 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 BCKDHBP21953 392 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 KDSRQ06136 332 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZNF33AQ06730 810 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SLC14A1Q13336 389 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 BIRC3Q13489 604 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 STK38Q15208 465 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SNRNP35Q16560 246 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZNF423Q2M1K9 1284 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 WDR45BQ5MNZ6 344 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 LY6G5CQ5SRR4 150 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 C10orf76Q5T2E6 689 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 GRAMD4Q6IC98 578 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 USP49Q70CQ1 688 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TADA2BQ86TJ2 420 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CHPFQ8IZ52 775 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PDILTQ8N807 584 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 NAT16Q8N8M0 369 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 IQUBQ8NA54 791 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SPRYD3Q8NCJ5 442 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 OR5B17Q8NGF7 314 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 KBTBD7Q8WVZ9 684 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 FOXJ1Q92949 421 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CCDC127Q96BQ5 260 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TLR8Q9NR97 1041 aaKnown RBP13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SPHK2Q9NRA0 654 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 MSRB2Q9Y3D2 182 aa13.02□□□□□ -0.33
HLA-DQB3-203ENST00000425319 MYH11P35749 1972 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 FRMD3A2A2Y4 597 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 EXOC3O60645 756 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 OLFM2O95897 454 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CST3P01034 146 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 KIR2DL1P43626 348 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TUBP50607 506 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CASP5P51878 434 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 USP46P62068 366 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ASIC1P78348 528 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PSMD6Q15008 389 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SLC39A14Q15043 492 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZNF667Q5HYK9 610 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 EMC10Q5UCC4 262 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 LIMS2Q7Z4I7 341 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CBWD2Q8IUF1 395 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 B3GALNT2Q8NCR0 500 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CXorf38Q8TB03 319 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 GOLGA5Q8TBA6 731 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZNF507Q8TCN5 953 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZCCHC14Q8WYQ9 949 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SMARCD1Q96GM5 515 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZNF396Q96N95 335 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CLIC6Q96NY7 704 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CGRRF1Q99675 332 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 MRPL45Q9BRJ2 306 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 DMAP1Q9NPF5 467 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PILRBQ9UKJ0 227 aa13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TPRP12270 2363 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB3-203ENST00000425319 WDR87Q6ZQQ6 2873 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ACACBO00763 2458 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 A0A1W2PQD8 194 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ARHGAP33O14559 1287 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 HOXC11O43248 304 aaPredicted RBP13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TULP3O75386 442 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 STAU1O95793 577 aaKnown RBP13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SPINK2P20155 84 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ATP5C1P36542 298 aaKnown RBP13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PTGER3P43115 390 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 WNT7BP56706 349 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SEMA3BQ13214 749 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 STARD3Q14849 445 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 C8orf34Q49A92 452 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZSWIM2Q8NEG5 633 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 UCMAQ8WVF2 138 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 DUSP9Q99956 384 aaKnown RBP13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZDHHC5Q9C0B5 715 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 APOBEC2Q9Y235 224 aaKnown RBP13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 STARD13Q9Y3M8 1113 aa13□□□□□ -0.33
HLA-DQB3-203ENST00000425319 UBE4BO95155 1302 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 FRYLO94915 3013 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 GFRA2O00451 464 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 NPC1O15118 1278 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 COCHO43405 550 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 HCRTO43612 131 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 IRF1P10914 325 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PDIA4P13667 645 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ITPKAP23677 461 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 CYP2J2P51589 502 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZNF132P52740 706 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SGSM1Q2NKQ1 1148 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 ZNF699Q32M78 642 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 MAP7D1Q3KQU3 841 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 PLEKHG6Q3KR16 790 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 FAM26FQ5R3K3 315 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 SNX30Q5VWJ9 437 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 KIAA1211LQ6NV74 962 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 TERB1Q8NA31 727 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 BBS2Q9BXC9 721 aa12.99□□□□□ -0.33
HLA-DQB3-203ENST00000425319 B3GNT5Q9BYG0 378 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms