RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 FUKQ8N0W3 1084 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 SPRYD3Q8NCJ5 442 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 TAF4BQ92750 862 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 ELMO3Q96BJ8 720 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 ZFRQ96KR1 1074 aaKnown RBP18.82■□□□□ 0.6
GPC1-203ENST00000425056 MED10Q9BTT4 135 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 KRT82Q9NSB4 513 aa18.82■□□□□ 0.6
GPC1-203ENST00000425056 IKBKBO14920 756 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 COCHO43405 550 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 ASS1P00966 412 aaKnown RBP18.81■□□□□ 0.6
GPC1-203ENST00000425056 RPN1P04843 607 aaKnown RBP18.81■□□□□ 0.6
GPC1-203ENST00000425056 LIMK1P53667 647 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 SGSM1Q2NKQ1 1148 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 PLA2G2CQ5R387 149 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 SCAMP5Q8TAC9 235 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 SPATA32Q96LK8 384 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 DUSP9Q99956 384 aaKnown RBP18.81■□□□□ 0.6
GPC1-203ENST00000425056 DUSP15Q9H1R2 295 aaPredicted RBP18.81■□□□□ 0.6
GPC1-203ENST00000425056 COMMD8Q9NX08 183 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 TBC1D14Q9P2M4 693 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 HMGXB4Q9UGU5 601 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 TRAF3IP3Q9Y228 551 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 LAMA1P25391 3075 aa18.81■□□□□ 0.6
GPC1-203ENST00000425056 FAM237AA0A1B0GTK4 181 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 E2F8A0AVK6 867 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 SCAMP3O14828 347 aaKnown RBP18.8■□□□□ 0.6
GPC1-203ENST00000425056 MAPK13O15264 365 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 AP1G2O75843 785 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 ADH1CP00326 375 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 ZDHHC11BP0C7U3 371 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 CHRM1P11229 460 aaPredicted RBP18.8■□□□□ 0.6
GPC1-203ENST00000425056 MPLP40238 635 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 ASPAP45381 313 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 SEC13P55735 322 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 KRT85P78386 507 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 SF3A2Q15428 464 aaKnown RBP18.8■□□□□ 0.6
GPC1-203ENST00000425056 CCDC6Q16204 474 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 AASDHQ4L235 1098 aaPredicted RBP18.8■□□□□ 0.6
GPC1-203ENST00000425056 C1orf220Q5T0J3 134 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 HECTD3Q5T447 861 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 CEP135Q66GS9 1140 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 RHBDF2Q6PJF5 856 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 SV2AQ7L0J3 742 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 ACOT1Q86TX2 421 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 UNC93AQ86WB7 457 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 RASSF3Q86WH2 238 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 CRYBG2Q8N1P7 616 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 C12orf50Q8NA57 414 aaPredicted RBP18.8■□□□□ 0.6
GPC1-203ENST00000425056 ZMIZ2Q8NF64 920 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 TSTD1Q8NFU3 115 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 OTUB2Q96DC9 234 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 CSNK1G1Q9HCP0 422 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 MMP17Q9ULZ9 603 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 FRMD4BQ9Y2L6 1034 aa18.8■□□□□ 0.6
GPC1-203ENST00000425056 CALUO43852 315 aaPredicted RBP18.79■□□□□ 0.6
GPC1-203ENST00000425056 RHOBTB3O94955 611 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 ADH5P11766 374 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 CCDC130P13994 396 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 PIK3CAP42336 1068 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 SYKP43405 635 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 NDST1P52848 882 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 MRPS21P82921 87 aaKnown RBP18.79■□□□□ 0.6
GPC1-203ENST00000425056 MESP2Q0VG99 397 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 ELF2Q15723 593 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 NFIL3Q16649 462 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 C2orf27AQ580R0 203 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 C12orf40Q86WS4 652 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 CHAMP1Q96JM3 812 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 PNKPQ96T60 521 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 SMOQ99835 787 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 CCSER2Q9H7U1 834 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 GMIPQ9P107 970 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 CHORDC1Q9UHD1 332 aaPredicted RBP18.79■□□□□ 0.6
GPC1-203ENST00000425056 ZDHHC9Q9Y397 364 aa18.79■□□□□ 0.6
GPC1-203ENST00000425056 NUP205Q92621 2012 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 ANTXRLA6NF34 631 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 KIF20AO95235 890 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 KAT7O95251 611 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 HLA-DRAP01903 254 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 ADRB1P08588 477 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 PRR29P0C7W0 189 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 NDUFA8P51970 172 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 DGKEP52429 567 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 INCA1Q0VD86 236 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 ORC1Q13415 861 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 CRY1Q16526 586 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 HSF5Q4G112 596 aaPredicted RBP18.78■□□□□ 0.6
GPC1-203ENST00000425056 PPM1JQ5JR12 505 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 SPOPLQ6IQ16 392 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 SFTPA1Q8IWL2 248 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 SLC2A14Q8TDB8 520 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 DDX1Q92499 740 aaKnown RBP18.78■□□□□ 0.6
GPC1-203ENST00000425056 CNOT6LQ96LI5 555 aaKnown RBP18.78■□□□□ 0.6
GPC1-203ENST00000425056 VPS45Q9NRW7 570 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 RXFP3Q9NSD7 469 aa18.78■□□□□ 0.6
GPC1-203ENST00000425056 TPRP12270 2363 aaKnown RBP18.77■□□□□ 0.6
GPC1-203ENST00000425056 PLXND1Q9Y4D7 1925 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 A0A0A0MRY4 1105 aa18.77■□□□□ 0.6
GPC1-203ENST00000425056 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.77■□□□□ 0.6
GPC1-203ENST00000425056 DCLK1O15075 740 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms