RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 SPARTQ8N0X7 666 aa5.89□□□□□ -1.47
LINC01040-201ENST00000425048 MS4A7Q9GZW8 240 aaPredicted RBP5.89□□□□□ -1.47
LINC01040-201ENST00000425048 SNX15Q9NRS6 342 aa5.89□□□□□ -1.47
LINC01040-201ENST00000425048 MAFFQ9ULX9 164 aa5.89□□□□□ -1.47
LINC01040-201ENST00000425048 DRG1Q9Y295 367 aaKnown RBP5.89□□□□□ -1.47
LINC01040-201ENST00000425048 HS3ST3B1Q9Y662 390 aa5.89□□□□□ -1.47
LINC01040-201ENST00000425048 PSG1P11464 419 aa5.88□□□□□ -1.47
LINC01040-201ENST00000425048 APEHP13798 732 aaKnown RBP5.88□□□□□ -1.47
LINC01040-201ENST00000425048 BCAT1P54687 386 aa5.88□□□□□ -1.47
LINC01040-201ENST00000425048 CTBP1Q13363 440 aa5.88□□□□□ -1.47
LINC01040-201ENST00000425048 LARS2Q15031 903 aaKnown RBP5.88□□□□□ -1.47
LINC01040-201ENST00000425048 NPY5RQ15761 445 aa5.88□□□□□ -1.47
LINC01040-201ENST00000425048 AWAT1Q58HT5 328 aa5.88□□□□□ -1.47
LINC01040-201ENST00000425048 ATAT1Q5SQI0 421 aa5.88□□□□□ -1.47
LINC01040-201ENST00000425048 ANKRD13BQ86YJ7 626 aa5.88□□□□□ -1.47
LINC01040-201ENST00000425048 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.88□□□□□ -1.47
LINC01040-201ENST00000425048 NUP88Q99567 741 aaPredicted RBP5.88□□□□□ -1.47
LINC01040-201ENST00000425048 MGAT4CQ9UBM8 478 aa5.88□□□□□ -1.47
LINC01040-201ENST00000425048 LPAR3Q9UBY5 353 aa5.88□□□□□ -1.47
LINC01040-201ENST00000425048 BTN3A1O00481 513 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 CTSAP10619 480 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 DIO1P49895 249 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 NANOS2P60321 138 aaKnown RBP5.87□□□□□ -1.47
LINC01040-201ENST00000425048 RPS13P62277 151 aaKnown RBP5.87□□□□□ -1.47
LINC01040-201ENST00000425048 ERV3-1Q14264 604 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 PTCHD3Q3KNS1 767 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 VSTM1Q6UX27 236 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 ZNF783Q6ZMS7 281 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 C16orf71Q8IYS4 520 aaPredicted RBP5.87□□□□□ -1.47
LINC01040-201ENST00000425048 ARFGAP1Q8N6T3 406 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 KBTBD7Q8WVZ9 684 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 RAPGEF4Q8WZA2 1011 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 CTHRC1Q96CG8 243 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 TCF7L1Q9HCS4 588 aa5.87□□□□□ -1.47
LINC01040-201ENST00000425048 GAR1Q9NY12 217 aaKnown RBP5.87□□□□□ -1.47
LINC01040-201ENST00000425048 CNOT3O75175 753 aaKnown RBP5.86□□□□□ -1.47
LINC01040-201ENST00000425048 TULP3O75386 442 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 CREB1P16220 341 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 ARFIP2P53365 341 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 RAB1AP62820 205 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 DCDC5Q6ZRR9 648 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 ZBTB46Q86UZ6 589 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 LINC01465Q8N7H1 131 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 ZNF548Q8NEK5 533 aaPredicted RBP5.86□□□□□ -1.47
LINC01040-201ENST00000425048 OR6B3Q8NGW1 331 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 CHMP4CQ96CF2 233 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 ZFYVE19Q96K21 471 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 HS6ST2Q96MM7 605 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 TRMOQ9BU70 441 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 TRIM54Q9BYV2 358 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 HIPK2Q9H2X6 1198 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 STAP2Q9UGK3 403 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 ANKRD6Q9Y2G4 727 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 TTC3P53804 2025 aa5.86□□□□□ -1.47
LINC01040-201ENST00000425048 TBC1D4O60343 1298 aa5.85□□□□□ -1.47
LINC01040-201ENST00000425048 EPHA3P29320 983 aa5.85□□□□□ -1.47
LINC01040-201ENST00000425048 HTR6P50406 440 aa5.85□□□□□ -1.47
LINC01040-201ENST00000425048 CFHR1Q03591 330 aa5.85□□□□□ -1.47
LINC01040-201ENST00000425048 SEC23BQ15437 767 aa5.85□□□□□ -1.47
LINC01040-201ENST00000425048 LVRNQ6Q4G3 990 aa5.85□□□□□ -1.47
LINC01040-201ENST00000425048 COLCA1Q6ZS62 124 aa5.85□□□□□ -1.47
LINC01040-201ENST00000425048 UBE2Q1Q7Z7E8 422 aa5.85□□□□□ -1.47
LINC01040-201ENST00000425048 MPP5Q8N3R9 675 aa5.85□□□□□ -1.47
LINC01040-201ENST00000425048 B4DGG1 531 aa5.84□□□□□ -1.47
LINC01040-201ENST00000425048 TMPRSS11DO60235 418 aa5.84□□□□□ -1.47
LINC01040-201ENST00000425048 OFD1O75665 1012 aa5.84□□□□□ -1.47
LINC01040-201ENST00000425048 THBS4P35443 961 aa5.84□□□□□ -1.47
LINC01040-201ENST00000425048 MAFAQ8NHW3 353 aaPredicted RBP5.84□□□□□ -1.47
LINC01040-201ENST00000425048 MPLKIPQ8TAP9 179 aa5.84□□□□□ -1.47
LINC01040-201ENST00000425048 THOC3Q96J01 351 aaKnown RBP5.84□□□□□ -1.47
LINC01040-201ENST00000425048 FAM234AQ9H0X4 552 aa5.84□□□□□ -1.47
LINC01040-201ENST00000425048 XPNPEP3Q9NQH7 507 aa5.84□□□□□ -1.47
LINC01040-201ENST00000425048 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.84□□□□□ -1.47
LINC01040-201ENST00000425048 ZNF112Q9UJU3 913 aa5.84□□□□□ -1.47
LINC01040-201ENST00000425048 A0A1W2PPL8 197 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 SMAD6O43541 496 aaKnown RBP5.83□□□□□ -1.48
LINC01040-201ENST00000425048 TOMM40O96008 361 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 ATF7P17544 494 aaPredicted RBP5.83□□□□□ -1.48
LINC01040-201ENST00000425048 UQCRC1P31930 480 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 MTHFSP49914 203 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 HSF1Q00613 529 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 CFHR3Q02985 330 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 RAB32Q13637 225 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 KCNB1Q14721 858 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 DLK2Q6UY11 383 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 DNAJB14Q8TBM8 379 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 VN1R3Q9BXE9 311 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 TRIM5Q9C035 493 aa5.83□□□□□ -1.48
LINC01040-201ENST00000425048 CLIC1O00299 241 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 SPRY2O43597 315 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 TIRAPP58753 221 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 SLC13A2Q13183 592 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 STIM1Q13586 685 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 SLC9C1Q4G0N8 1177 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 CC2D1BQ5T0F9 858 aaKnown RBP5.82□□□□□ -1.48
LINC01040-201ENST00000425048 DAB2IPQ5VWQ8 1189 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 DAAM2Q86T65 1068 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 NGDNQ8NEJ9 315 aaKnown RBP5.82□□□□□ -1.48
LINC01040-201ENST00000425048 DPH1Q9BZG8 443 aa5.82□□□□□ -1.48
LINC01040-201ENST00000425048 VPS33BQ9H267 617 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms