RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 VRTNQ9H8Y1 702 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 TRPM5Q9NZQ8 1165 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 THADAQ6YHU6 1953 aa13.8□□□□□ -0.2
VRK3-203ENST00000424804 GON4LQ3T8J9 2241 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 ZFHX4Q86UP3 3567 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 A0A0A0MRY4 1105 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 PDXKO00764 312 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 C4BPAP04003 597 aaKnown RBP13.79□□□□□ -0.2
VRK3-203ENST00000424804 CYP17A1P05093 508 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 SLC6A11P48066 632 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 PGFP49763 221 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 TAF10Q12962 218 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 BIRC3Q13489 604 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 TRPC3Q13507 836 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 TDRD10Q5VZ19 366 aaKnown RBP13.79□□□□□ -0.2
VRK3-203ENST00000424804 RHBDF2Q6PJF5 856 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 FILIP1Q7Z7B0 1213 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 RASSF3Q86WH2 238 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 OR6B3Q8NGW1 331 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 PARD3BQ8TEW8 1205 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 TMEM174Q8WUU8 243 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 WBP2Q969T9 261 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 FRMD4BQ9Y2L6 1034 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 PCDHA5Q9Y5H7 936 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 USP24Q9UPU5 2620 aa13.79□□□□□ -0.2
VRK3-203ENST00000424804 FAM92AA1XBS5 289 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 LRRIQ3A6PVS8 624 aaPredicted RBP13.78□□□□□ -0.2
VRK3-203ENST00000424804 TRIM66O15016 1216 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 NR2F2P24468 414 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 PPP3CCP48454 512 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 DHCR24Q15392 516 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 C1orf220Q5T0J3 134 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 SNX30Q5VWJ9 437 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 TMEM92Q6UXU6 159 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 C12orf40Q86WS4 652 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 PHTF2Q8N3S3 785 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 GUF1Q8N442 669 aaKnown RBP13.78□□□□□ -0.2
VRK3-203ENST00000424804 B3GALNT2Q8NCR0 500 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 TTC16Q8NEE8 873 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 ZMIZ2Q8NF64 920 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 TIGD1Q96MW7 591 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 KCNK16Q96T55 309 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 SNX25Q9H3E2 840 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 SMYD3Q9H7B4 428 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 MMRN2Q9H8L6 949 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 HCN2Q9UL51 889 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 CPQQ9Y646 472 aa13.78□□□□□ -0.2
VRK3-203ENST00000424804 BIN1O00499 593 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 SCAMP3O14828 347 aaKnown RBP13.77□□□□□ -0.21
VRK3-203ENST00000424804 FOXD2O60548 495 aaPredicted RBP13.77□□□□□ -0.21
VRK3-203ENST00000424804 KRT37O76014 449 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 APBB3O95704 486 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 ZDHHC11BP0C7U3 371 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 CCDC192P0DO97 292 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 ATICP31939 592 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 DLG4P78352 724 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 NR1H3Q13133 447 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 EMC10Q5UCC4 262 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 TCEAL6Q6IPX3 200 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 SCAMP5Q8TAC9 235 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 OLIG1Q8TAK6 271 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 TCEAL3Q969E4 200 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 EEF2KMTQ96G04 330 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.21
VRK3-203ENST00000424804 TNRC6BQ9UPQ9 1833 aaKnown RBP13.77□□□□□ -0.21
VRK3-203ENST00000424804 INVSQ9Y283 1065 aa13.77□□□□□ -0.21
VRK3-203ENST00000424804 BCLAF3A2AJT9 711 aaKnown RBP13.76□□□□□ -0.21
VRK3-203ENST00000424804 A8MXQ7 604 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 COCHO43405 550 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 GREM1O60565 184 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 BEST1O76090 585 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 NFATC1O95644 943 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 BCKDHBP21953 392 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 ANXA13P27216 316 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 MPLP40238 635 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 PRCPP42785 496 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 KIR2DL1P43626 348 aaPredicted RBP13.76□□□□□ -0.21
VRK3-203ENST00000424804 ADAM9Q13443 819 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 C2orf27AQ580R0 203 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 STPG1Q5TH74 334 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 ZNF658Q5TYW1 1059 aaPredicted RBP13.76□□□□□ -0.21
VRK3-203ENST00000424804 SLC9A9Q8IVB4 645 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 FUKQ8N0W3 1084 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 NUP93Q8N1F7 819 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 GSDMAQ96QA5 445 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 TSG101Q99816 390 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 SMOQ99835 787 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 ELOVL4Q9GZR5 314 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.76□□□□□ -0.215e-6■■■■■ 65.2
VRK3-203ENST00000424804 SMPD4Q9NXE4 827 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 CFAP97Q9P2B7 532 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 CHORDC1Q9UHD1 332 aaPredicted RBP13.76□□□□□ -0.21
VRK3-203ENST00000424804 MMP17Q9ULZ9 603 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 TRAF3IP3Q9Y228 551 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 PLXND1Q9Y4D7 1925 aa13.76□□□□□ -0.21
VRK3-203ENST00000424804 PI4KAP42356 2102 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 MYH10P35580 1976 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 ADAM23O75077 832 aa13.75□□□□□ -0.21
VRK3-203ENST00000424804 KRT13P13646 458 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms