RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 ZNF747Q9BV97 191 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 ACAT2Q9BWD1 397 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 WNT8AQ9H1J5 351 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 MS4A5Q9H3V2 200 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 PRDM13Q9H4Q3 707 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 EPS8L2Q9H6S3 715 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 ZMAT4Q9H898 229 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 C14orf93Q9H972 538 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 ACSS2Q9NR19 701 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 PAPOLBQ9NRJ5 636 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 UCKL1Q9NWZ5 548 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 RAI14Q9P0K7 980 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 OAZ3Q9UMX2 235 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 ZFR2Q9UPR6 939 aaKnown RBP4.02□□□□□ -1.77
SF3B1-205ENST00000424674 CLCA2Q9UQC9 943 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 CNPY2Q9Y2B0 182 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 TESMINQ9Y4I5 508 aa4.02□□□□□ -1.77
SF3B1-205ENST00000424674 PRAMEF22A3QJZ6 481 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 LCHNA4D1U4 455 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 AQP12BA6NM10 295 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 F8W8V4 182 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 MYO1FO00160 1098 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 CASQ2O14958 399 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 THAP12O43422 761 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 ZBTB14O43829 449 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 CLASP2O75122 1294 aaKnown RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 TSC22D2O75157 780 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 SEC22BO75396 215 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 PALMO75781 387 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 BEST1O76090 585 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 HMGCRP04035 888 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 A1BGP04217 495 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 MMEP08473 750 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 ITGA2BP08514 1039 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 ALAS1P13196 640 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 IFNAR1P17181 557 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 GAP43P17677 238 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 IL4RP24394 825 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 CTCFP49711 727 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 MAP2K6P52564 334 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 KIF11P52732 1056 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 ACTR2P61160 394 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 HERVK_113P62684 666 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 YWHAHQ04917 246 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 KCNB1Q14721 858 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 PRKD1Q15139 912 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 RNF151Q2KHN1 245 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 WSCD2Q2TBF2 565 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 CT83Q5H943 113 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 TCP11X2Q5H9J9 407 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 NAA35Q5VZE5 725 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 ARL6IP4Q66PJ3 421 aaKnown RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 IYDQ6PHW0 289 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 KLHDC10Q6PID8 442 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 KLHL24Q6TFL4 600 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 CXXC5Q7LFL8 322 aaKnown RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 SZRD1Q7Z422 152 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 R3HCC1LQ7Z5L2 792 aaKnown RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 RTN4RL1Q86UN2 441 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 TAX1BP1Q86VP1 789 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 COL23A1Q86Y22 540 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 GATAD2AQ86YP4 633 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 NOSTRINQ8IVI9 506 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 SRBD1Q8N5C6 995 aaKnown RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 C10orf53Q8N6V4 93 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 ETNPPLQ8TBG4 499 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 PIGOQ8TEQ8 1089 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 STYXQ8WUJ0 223 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 AFG1LQ8WV93 481 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 ARHGEF2Q92974 986 aaKnown RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 RILPL2Q969X0 211 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 EXOC4Q96A65 974 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 MAML3Q96JK9 1138 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 COG8Q96MW5 612 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 UIMC1Q96RL1 719 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 SCAND2PQ9GZW5 306 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 TNMDQ9H2S6 317 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 FANCFQ9NPI8 374 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 NECTIN3Q9NQS3 549 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 CNNM1Q9NRU3 951 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 GALNT8Q9NY28 637 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 BTBD7Q9P203 1132 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 ZNF624Q9P2J8 865 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 PI4KBQ9UBF8 816 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 UBA2Q9UBT2 640 aaPredicted RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 AFF4Q9UHB7 1163 aaKnown RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 MSRAQ9UJ68 235 aa4.01□□□□□ -1.77
SF3B1-205ENST00000424674 HOOK1Q9UJC3 728 aaKnown RBP4.01□□□□□ -1.77
SF3B1-205ENST00000424674 HMX3A6NHT5 357 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 CLCA1A8K7I4 914 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 KIAA0355O15063 1070 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 SPTLC2O15270 562 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 ZBTB43O43298 467 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 FMO6PO60774 539 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 NOL3O60936 208 aaKnown RBP4□□□□□ -1.77
SF3B1-205ENST00000424674 FZD7O75084 574 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 PPFIA2O75334 1257 aa4□□□□□ -1.77
SF3B1-205ENST00000424674 STAM2O75886 525 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms