RNA–Protein interactions for RNA: ENST00000424544.2

DDR1-234, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-234ENST00000424544 ZNF699Q32M78 642 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 FAM160A2Q8N612 972 aaPredicted RBP17.16■□□□□ 0.34
DDR1-234ENST00000424544 ZMIZ2Q8NF64 920 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 GAB3Q8WWW8 586 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 EXOC4Q96A65 974 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 ZFRQ96KR1 1074 aaKnown RBP17.16■□□□□ 0.34
DDR1-234ENST00000424544 SLITRK1Q96PX8 696 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 DUSP9Q99956 384 aaKnown RBP17.16■□□□□ 0.34
DDR1-234ENST00000424544 CSNK1G1Q9HCP0 422 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 RMND1Q9NWS8 449 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 COMMD8Q9NX08 183 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 EBF1Q9UH73 591 aa17.16■□□□□ 0.34
DDR1-234ENST00000424544 K7EQS6 105 aa17.15■□□□□ 0.34
DDR1-234ENST00000424544 RTN3O95197 1032 aaPredicted RBP17.15■□□□□ 0.34
DDR1-234ENST00000424544 CSRP2Q16527 193 aa17.15■□□□□ 0.34
DDR1-234ENST00000424544 RHBDF2Q6PJF5 856 aa17.15■□□□□ 0.34
DDR1-234ENST00000424544 PRR23BQ6ZRT6 265 aa17.15■□□□□ 0.34
DDR1-234ENST00000424544 UNC93AQ86WB7 457 aa17.15■□□□□ 0.34
DDR1-234ENST00000424544 SCAMP5Q8TAC9 235 aa17.15■□□□□ 0.34
DDR1-234ENST00000424544 LOXL4Q96JB6 756 aa17.15■□□□□ 0.34
DDR1-234ENST00000424544 ZC3H10Q96K80 434 aaKnown RBP17.15■□□□□ 0.34
DDR1-234ENST00000424544 TNIP3Q96KP6 325 aa17.15■□□□□ 0.34
DDR1-234ENST00000424544 SEMA4GQ9NTN9 838 aa17.15■□□□□ 0.34
DDR1-234ENST00000424544 CHORDC1Q9UHD1 332 aaPredicted RBP17.15■□□□□ 0.34
DDR1-234ENST00000424544 HELZP42694 1942 aaKnown RBP17.15■□□□□ 0.34
DDR1-234ENST00000424544 AKAP3O75969 853 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 BEST1O76090 585 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 NFATC1O95644 943 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 ASPAP45381 313 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 PXNP49023 591 aaPredicted RBP17.14■□□□□ 0.33
DDR1-234ENST00000424544 ZCWPW2Q504Y3 356 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 FILIP1Q7Z7B0 1213 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 ACOT1Q86TX2 421 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 FAM35AQ86V20 835 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
DDR1-234ENST00000424544 PDZD8Q8NEN9 1154 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 RPLP0P6Q8NHW5 317 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 SMARCD1Q96GM5 515 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 SMOQ99835 787 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 MAN1B1Q9UKM7 699 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 USP18Q9UMW8 372 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 SLC8A2Q9UPR5 921 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 CPQQ9Y646 472 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 SPAG17Q6Q759 2223 aa17.14■□□□□ 0.33
DDR1-234ENST00000424544 MYOFQ9NZM1 2061 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 ANTXRLA6NF34 631 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 COCHO43405 550 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 CALUO43852 315 aaPredicted RBP17.13■□□□□ 0.33
DDR1-234ENST00000424544 CYP17A1P05093 508 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 PGFP49763 221 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 TUBP50607 506 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 VAMP7P51809 220 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 PPP3CAQ08209 521 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 INCA1Q0VD86 236 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 DHCR24Q15392 516 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 ZSCAN23Q3MJ62 389 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 ISM2Q6H9L7 571 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 SPOPLQ6IQ16 392 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 SASS6Q6UVJ0 657 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 TRIML1Q8N9V2 468 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 USP33Q8TEY7 942 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 RTKNQ9BST9 563 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 GTPBP4Q9BZE4 634 aaKnown RBP17.13■□□□□ 0.33
DDR1-234ENST00000424544 APOBEC3GQ9HC16 384 aaKnown RBP17.13■□□□□ 0.33
DDR1-234ENST00000424544 DMAP1Q9NPF5 467 aaPredicted RBP17.13■□□□□ 0.33
DDR1-234ENST00000424544 HMGXB4Q9UGU5 601 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 FRMD4BQ9Y2L6 1034 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 EML5Q05BV3 1969 aa17.13■□□□□ 0.33
DDR1-234ENST00000424544 MYO16Q9Y6X6 1858 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 E2F8A0AVK6 867 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 BIN1O00499 593 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 SLC9A3R1O14745 358 aaPredicted RBP17.12■□□□□ 0.33
DDR1-234ENST00000424544 RPP40O75818 363 aaKnown RBP17.12■□□□□ 0.33
DDR1-234ENST00000424544 KIF20AO95235 890 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 HLA-DRAP01903 254 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 NDST1P52848 882 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 SLC5A3P53794 718 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 MESP2Q0VG99 397 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 MORC3Q14149 939 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 CEP135Q66GS9 1140 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 CACNA2D4Q7Z3S7 1137 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 C12orf29Q8N999 325 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 CCDC26Q8TAB7 109 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 WHAMMQ8TF30 809 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 FBXO32Q969P5 355 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 TWNKQ96RR1 684 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 HNRNPABQ99729 332 aaKnown RBP17.12■□□□□ 0.33
DDR1-234ENST00000424544 ANP32EQ9BTT0 268 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 SMPD4Q9NXE4 827 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.12■□□□□ 0.33
DDR1-234ENST00000424544 RALGAPA1Q6GYQ0 2036 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 LAMA1P25391 3075 aa17.12■□□□□ 0.33
DDR1-234ENST00000424544 SYCE3A1L190 88 aa17.11■□□□□ 0.33
DDR1-234ENST00000424544 HHLA1C9JL84 531 aa17.11■□□□□ 0.33
DDR1-234ENST00000424544 SLC30A4O14863 429 aa17.11■□□□□ 0.33
DDR1-234ENST00000424544 GREM1O60565 184 aa17.11■□□□□ 0.33
DDR1-234ENST00000424544 AP1G2O75843 785 aa17.11■□□□□ 0.33
DDR1-234ENST00000424544 ABL1P00519 1130 aa17.11■□□□□ 0.33
DDR1-234ENST00000424544 P4HA1P13674 534 aa17.11■□□□□ 0.33
DDR1-234ENST00000424544 CCDC130P13994 396 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms