RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 STK32AQ8WU08 396 aa19.47■□□□□ 0.71
HDAC6-205ENST00000423941 FBXO32Q969P5 355 aa19.47■□□□□ 0.71
HDAC6-205ENST00000423941 LRRC3BQ96PB8 259 aa19.47■□□□□ 0.71
HDAC6-205ENST00000423941 SLC22A12Q96S37 553 aa19.47■□□□□ 0.71
HDAC6-205ENST00000423941 SLITRK6Q9H5Y7 841 aa19.47■□□□□ 0.71
HDAC6-205ENST00000423941 CHORDC1Q9UHD1 332 aaPredicted RBP19.47■□□□□ 0.71
HDAC6-205ENST00000423941 PCDHGC3Q9UN70 934 aa19.47■□□□□ 0.71
HDAC6-205ENST00000423941 DUSP12Q9UNI6 340 aa19.47■□□□□ 0.71
HDAC6-205ENST00000423941 GOLGA6L19H0YKK7 550 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 MED7O43513 233 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 PRAMEF12O95522 483 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 CFHP08603 1231 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 PNMA6AP0CW24 399 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-205ENST00000423941 TCF3P15923 654 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 GNA15P30679 374 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 PBX1P40424 430 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 VIPR2P41587 438 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 TUBP50607 506 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 BPIFB4P59827 614 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 POLR2FP61218 127 aaKnown RBP19.46■□□□□ 0.71
HDAC6-205ENST00000423941 TPM4P67936 248 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 RAPGEF1Q13905 1077 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 FILIP1LQ4L180 1135 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 PMF1Q6P1K2 205 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 VITQ6UXI7 678 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 BHLHA9Q7RTU4 235 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 MFSD6LQ8IWD5 586 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 ST13P5Q8NFI4 369 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-205ENST00000423941 DDX1Q92499 740 aaKnown RBP19.46■□□□□ 0.71
HDAC6-205ENST00000423941 USP13Q92995 863 aaPredicted RBP19.46■□□□□ 0.71
HDAC6-205ENST00000423941 HSFY1Q96LI6 401 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 CYP2S1Q96SQ9 504 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 KXD1Q9BQD3 176 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 RNF38Q9H0F5 515 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 LHX5Q9H2C1 402 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 SLC2A4RGQ9NR83 387 aa19.46■□□□□ 0.71
HDAC6-205ENST00000423941 SRFP11831 508 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 USP8P40818 1118 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 SLC7A9P82251 487 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 FCHO2Q0JRZ9 810 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 SCD5Q86SK9 330 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 SLC47A2Q86VL8 602 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 WDTC1Q8N5D0 677 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 NEK11Q8NG66 645 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 SECISBP2LQ93073 1101 aaKnown RBP19.45■□□□□ 0.7
HDAC6-205ENST00000423941 SMOC2Q9H3U7 446 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 EPHX3Q9H6B9 360 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 CYLDQ9NQC7 956 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 TDP1Q9NUW8 608 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 GMIPQ9P107 970 aa19.45■□□□□ 0.7
HDAC6-205ENST00000423941 TRAV19A0A0A6YYK7 116 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 HEPACAM2A8MVW5 462 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 M0QYV0 167 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 THAP12O43422 761 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 SERPINC1P01008 464 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 USP17L7P0C7H9 530 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 CYP11B1P15538 503 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 HDCP19113 662 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 PDE6CP51160 858 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 ZXDBP98169 803 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 IFRD2Q12894 506 aaPredicted RBP19.44■□□□□ 0.7
HDAC6-205ENST00000423941 DENND1BQ6P3S1 775 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 CELF5Q8N6W0 485 aaKnown RBP19.44■□□□□ 0.7
HDAC6-205ENST00000423941 ARL14EPQ8N8R7 260 aaPredicted RBP19.44■□□□□ 0.7
HDAC6-205ENST00000423941 DEPDC1BQ8WUY9 529 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 SLC4A5Q9BY07 1137 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 KIF9Q9HAQ2 790 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 NMUR1Q9HB89 426 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 NLRC4Q9NPP4 1024 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 TRPV5Q9NQA5 729 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 TLR8Q9NR97 1041 aaKnown RBP19.44■□□□□ 0.7
HDAC6-205ENST00000423941 OSER1Q9NX31 292 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 COL4A2P08572 1712 aa19.44■□□□□ 0.7
HDAC6-205ENST00000423941 TECTAO75443 2155 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 CUL9Q8IWT3 2517 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 NARSO43776 548 aaKnown RBP19.43■□□□□ 0.7
HDAC6-205ENST00000423941 PSMC3P17980 439 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 CDH5P33151 784 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-205ENST00000423941 SOX5P35711 763 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 AVPR1AP37288 418 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 PSEN1P49768 467 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 TKTL1P51854 596 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 UBASH3AP57075 661 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 GPC5P78333 572 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 FIGNQ5HY92 759 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 TMEM110Q86TL2 294 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 KIAA1958Q8N8K9 716 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 RIN3Q8TB24 985 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 BAP1Q92560 729 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 ASIC4Q96FT7 647 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 TTYH3Q9C0H2 523 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 CNGB3Q9NQW8 809 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 CLIC5Q9NZA1 410 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 CYTH4Q9UIA0 394 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 MYO6Q9UM54 1294 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 ARHGAP26Q9UNA1 814 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 CCL26Q9Y258 94 aa19.43■□□□□ 0.7
HDAC6-205ENST00000423941 ARNTLO00327 626 aa19.42■□□□□ 0.7
HDAC6-205ENST00000423941 COCHO43405 550 aa19.42■□□□□ 0.7
HDAC6-205ENST00000423941 ZBED1O96006 694 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms