RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 PRKD2Q9BZL6 878 aa14.01□□□□□ -0.17
COL20A1-203ENST00000422202 UBXN6Q9BZV1 441 aa14.01□□□□□ -0.17
COL20A1-203ENST00000422202 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL20A1-203ENST00000422202 TUBGCP4Q9UGJ1 667 aa14.01□□□□□ -0.17
COL20A1-203ENST00000422202 DGAT1O75907 488 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 HIST1H2ABP04908 130 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 KLC1Q07866 573 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 HIST3H2AQ7L7L0 130 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 HIST1H2ACQ93077 130 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 ELL3Q9HB65 397 aaPredicted RBP14□□□□□ -0.17
COL20A1-203ENST00000422202 IL1RAPL1Q9NZN1 696 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 STAP2Q9UGK3 403 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 UBTFL6P0CB48 400 aaPredicted RBP14□□□□□ -0.17
COL20A1-203ENST00000422202 FNDC3BQ53EP0 1204 aaKnown RBP14□□□□□ -0.17
COL20A1-203ENST00000422202 TTC23Q5W5X9 447 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 RRAGCQ9HB90 399 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 NR5A2O00482 541 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 ATMINO43313 823 aaPredicted RBP14□□□□□ -0.17
COL20A1-203ENST00000422202 MAPK1P28482 360 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 MRNIPQ6NTE8 343 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 ATG16L2Q8NAA4 619 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 MRGBPQ9NV56 204 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 SYNMO15061 1565 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 IL2P60568 153 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 TRIP10Q15642 601 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 RAD21L1Q9H4I0 556 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 SH3GLB1Q9Y371 365 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 HNRNPH2P55795 449 aaKnown RBP14□□□□□ -0.17
COL20A1-203ENST00000422202 CYP4X1Q8N118 509 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 MANSC1Q9H8J5 431 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 SOHLH2Q9NX45 425 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 GGA3Q9NZ52 723 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 NR2E3Q9Y5X4 410 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 GRIK3Q13003 919 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 BBS4Q96RK4 519 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 LAMC1P11047 1609 aa14□□□□□ -0.17
COL20A1-203ENST00000422202 PRMT3O60678 531 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 SEPT1Q8WYJ6 367 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 SNX6Q9UNH7 406 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 SAC3D1A6NKF1 404 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 C19orf81C9J6K1 198 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 SARSP49591 514 aaKnown RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 PTPN12Q05209 780 aaKnown RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 EPHA7Q15375 998 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 STRIP1Q5VSL9 837 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 DOK6Q6PKX4 331 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 NT5DC3Q86UY8 548 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 SCAIQ8N9R8 606 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 ROGDIQ9GZN7 287 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 HPS5Q9UPZ3 1129 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 LOC100653049A0A140TA62 436 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 KATNA1O75449 491 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 KRT34O76011 436 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 SNRPAP09012 282 aaKnown RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 SKIV2L2P42285 1042 aaKnown RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 UTP15Q8TED0 518 aaKnown RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 SLC20A1Q8WUM9 679 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 DCP1AQ9NPI6 582 aaPredicted RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 MTO1Q9Y2Z2 717 aaKnown RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 ORC1Q13415 861 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 MTFMTQ96DP5 389 aaKnown RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 SLITRK2Q9H156 845 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 TRIM10Q9UDY6 481 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 NARFQ9UHQ1 456 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 PZPP20742 1482 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 TRIM24O15164 1050 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 PQBP1O60828 265 aaKnown RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 MAP3K6O95382 1288 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 GLRBP48167 497 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 CCT8P50990 548 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 DDR2Q16832 855 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 CCDC185Q8N715 623 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 PDGFCQ9NRA1 345 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 NUP153P49790 1475 aaKnown RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 FOXP2O15409 715 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 TAF6P49848 677 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 EFEMP1Q12805 493 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 TRIM16LQ309B1 348 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 DSG4Q86SJ6 1040 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 PACSIN1Q9BY11 444 aa13.99□□□□□ -0.17
COL20A1-203ENST00000422202 AAR2Q9Y312 384 aaKnown RBP13.99□□□□□ -0.17
COL20A1-203ENST00000422202 CBX4O00257 560 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 MSH4O15457 936 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 TIPRLO75663 272 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 TRIQKQ629K1 86 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 ESRP1Q6NXG1 681 aaKnown RBP13.98□□□□□ -0.17
COL20A1-203ENST00000422202 PEG10Q86TG7 708 aaKnown RBP13.98□□□□□ -0.17
COL20A1-203ENST00000422202 OSCP1Q8WVF1 389 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 SLC9A7Q96T83 725 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 RSAD1Q9HA92 442 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 PVALEFA0A1B0GWK0 134 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 FAM220BPB1ANY3 271 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 MTSS1O43312 755 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 OR6B1O95007 311 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 SRSF11Q05519 484 aaKnown RBP13.98□□□□□ -0.17
COL20A1-203ENST00000422202 ALG11Q2TAA5 492 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 PACS1Q6VY07 963 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 SERPINB12Q96P63 405 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 C10orf88Q9H8K7 445 aa13.98□□□□□ -0.17
COL20A1-203ENST00000422202 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms