RNA–Protein interactions for RNA: ENST00000421625.6

USP48-205, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 2,818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-205ENST00000421625 LPCAT4Q643R3 524 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 KIAA0319LQ8IZA0 1049 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 OR6Y1Q8NGX8 325 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 ARHGAP28Q9P2N2 729 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 TJP2Q9UDY2 1190 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 DNAJB4Q9UDY4 337 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 HERC5Q9UII4 1024 aaKnown RBP22.15■■□□□ 1.14
USP48-205ENST00000421625 TBC1D30Q9Y2I9 924 aa22.15■■□□□ 1.14
USP48-205ENST00000421625 HARSP12081 509 aaKnown RBP22.14■■□□□ 1.14
USP48-205ENST00000421625 TBXAS1P24557 533 aaPredicted RBP22.14■■□□□ 1.14
USP48-205ENST00000421625 CAP2P40123 477 aa22.14■■□□□ 1.14
USP48-205ENST00000421625 PGM5Q15124 567 aa22.14■■□□□ 1.14
USP48-205ENST00000421625 TTC39BQ5VTQ0 682 aaPredicted RBP22.14■■□□□ 1.14
USP48-205ENST00000421625 GPAT2Q6NUI2 795 aa22.14■■□□□ 1.14
USP48-205ENST00000421625 PPP1R2P3Q6NXS1 205 aa22.14■■□□□ 1.14
USP48-205ENST00000421625 RASSF3Q86WH2 238 aa22.14■■□□□ 1.14
USP48-205ENST00000421625 JOSD2Q8TAC2 188 aa22.14■■□□□ 1.14
USP48-205ENST00000421625 VCX3BQ9H321 246 aa22.14■■□□□ 1.14
USP48-205ENST00000421625 VCX3AQ9NNX9 186 aa22.14■■□□□ 1.14
USP48-205ENST00000421625 SLC9A2Q9UBY0 812 aa22.14■■□□□ 1.14
USP48-205ENST00000421625 OPHN1O60890 802 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 LRCH4O75427 683 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 C6orf222P0C671 652 aaPredicted RBP22.14■■□□□ 1.13
USP48-205ENST00000421625 KDELR1P24390 212 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 SLC25A3Q00325 362 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 TAF5Q15542 800 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 ACAD11Q709F0 780 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 SLC26A11Q86WA9 606 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 PDSS2Q86YH6 399 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 RFX6Q8HWS3 928 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 ST13P4Q8IZP2 240 aaPredicted RBP22.14■■□□□ 1.13
USP48-205ENST00000421625 NIPA2Q8N8Q9 360 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 POLR3FQ9H1D9 316 aaPredicted RBP22.14■■□□□ 1.13
USP48-205ENST00000421625 SMYD3Q9H7B4 428 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 C17orf75Q9HAS0 396 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 S100A14Q9HCY8 104 aa22.14■■□□□ 1.13
USP48-205ENST00000421625 CLRN2A0PK11 232 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 UGT1A9O60656 530 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 SORBS2O94875 1100 aaKnown RBP22.13■■□□□ 1.13
USP48-205ENST00000421625 C1QAP02745 245 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 YY1P25490 414 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 SFNP31947 248 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 CPOXP36551 454 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 PTGER2P43116 358 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 NCOA4Q13772 614 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 LRRC23Q53EV4 343 aaPredicted RBP22.13■■□□□ 1.13
USP48-205ENST00000421625 ZCCHC23Q6ZST2 131 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 TTC13Q8NBP0 860 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 FAM81AQ8TBF8 368 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 UGT1A7Q9HAW7 530 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 UGT1A10Q9HAW8 530 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 UGT1A8Q9HAW9 530 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 TTLL3Q9Y4R7 772 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 SLC4A7Q9Y6M7 1214 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 A6NJR5 290 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 RBP3P10745 1247 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 KRT76Q01546 638 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 HNRNPDQ14103 355 aaKnown RBP22.13■■□□□ 1.13
USP48-205ENST00000421625 ATG16L1Q676U5 607 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 NPNTQ6UXI9 565 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 POLNQ7Z5Q5 900 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 NUDCD3Q8IVD9 361 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 CDAN1Q8IWY9 1227 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 FAM172AQ8WUF8 416 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 HAPLN3Q96S86 360 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 CCDC28BQ9BUN5 200 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 PCSK1NQ9UHG2 260 aa22.13■■□□□ 1.13
USP48-205ENST00000421625 HBS1LQ9Y450 684 aaKnown RBP22.13■■□□□ 1.13
USP48-205ENST00000421625 ARHGAP42A6NI28 874 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 PLA2G6O60733 806 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 SP4Q02446 784 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 MSLNQ13421 630 aaPredicted RBP22.12■■□□□ 1.13
USP48-205ENST00000421625 KYAT3Q6YP21 454 aaKnown RBP22.12■■□□□ 1.13
USP48-205ENST00000421625 DHDDSQ86SQ9 333 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 TMEM35BQ8NCS4 154 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 OPTNQ96CV9 577 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 SIRPGQ9P1W8 387 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 STBD1O95210 358 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 LSAMPQ13449 338 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 RAVER2Q9HCJ3 691 aaKnown RBP22.12■■□□□ 1.13
USP48-205ENST00000421625 IL1RAPL1Q9NZN1 696 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 FKBP6O75344 327 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 STAM2O75886 525 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 TOP3BO95985 862 aaKnown RBP22.12■■□□□ 1.13
USP48-205ENST00000421625 CST3P01034 146 aaPredicted RBP22.12■■□□□ 1.13
USP48-205ENST00000421625 AQP4P55087 323 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 RPS6P62753 249 aaKnown RBP22.12■■□□□ 1.13
USP48-205ENST00000421625 RALGPS1Q5JS13 557 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 CRLF3Q8IUI8 442 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 POU5F2Q8N7G0 328 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 UBR7Q8N806 425 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 TFAP2BQ92481 460 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 USP6NLQ92738 828 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 SEPT9Q9UHD8 586 aaPredicted RBP22.12■■□□□ 1.13
USP48-205ENST00000421625 ADAMTS6Q9UKP5 1117 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 EFR3BQ9Y2G0 817 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 PCDHA10Q9Y5I2 948 aa22.12■■□□□ 1.13
USP48-205ENST00000421625 RFPL1O75677 317 aa22.11■■□□□ 1.13
USP48-205ENST00000421625 SNRPAP09012 282 aaKnown RBP22.11■■□□□ 1.13
USP48-205ENST00000421625 HIC1Q14526 733 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms