RNA–Protein interactions for RNA: ENST00000420798.6

TRO-208, Transcript of trophinin, humanhuman

TSL 2 BASIC

Gene TRO, Length 3,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-208ENST00000420798 XYLT2Q9H1B5 865 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 ROPN1Q9HAT0 212 aaPredicted RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 CYP4F11Q9HBI6 524 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 ETNK2Q9NVF9 386 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 RBPJLQ9UBG7 517 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 PPARGC1AQ9UBK2 798 aaKnown RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 CPSF3Q9UKF6 684 aaKnown RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 C5orf60A6NFR6 353 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 H0YCG3 227 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 LYPLA1O75608 230 aaPredicted RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 CYP3A5P20815 502 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 PCK1P35558 622 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 YWHAEP62258 255 aaKnown RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 CACNB2Q08289 660 aaPredicted RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 DPYSL3Q14195 570 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 PIGHQ14442 188 aaPredicted RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 TMEM132DQ14C87 1099 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 IER5Q5VY09 327 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 XYLT1Q86Y38 959 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 VPS52Q8N1B4 723 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 WDR83Q9BRX9 315 aaKnown RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 RNF39Q9H2S5 420 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 KDM4CQ9H3R0 1056 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 DPP3Q9NY33 737 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 EVPLQ92817 2033 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 BHMG1C9JSJ3 638 aaPredicted RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 TPH1P17752 444 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 ZNF280AP59817 542 aaPredicted RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 BEX3Q00994 111 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 NR1H3Q13133 447 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 CLUL1Q15846 466 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 ANKRD20A3Q5VUR7 823 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 EIF1ADQ8N9N8 165 aaKnown RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 ANKLE1Q8NAG6 615 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 AZIN2Q96A70 460 aa10.39□□□□□ -0.75
TRO-208ENST00000420798 NXF3Q9H4D5 531 aaKnown RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 ZC3H7BQ9UGR2 993 aaKnown RBP10.39□□□□□ -0.75
TRO-208ENST00000420798 TCRBV9S1A1TA0A576 114 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 ATP9BO43861 1147 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 PAEPP09466 180 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 KCNA4P22459 653 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 GBP1P32455 592 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 NDUFV1P49821 464 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 GEMIN4P57678 1058 aaKnown RBP10.38□□□□□ -0.75
TRO-208ENST00000420798 CCDC125Q86Z20 511 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 KCTD17Q8N5Z5 321 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 C3orf20Q8ND61 904 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 SHKBP1Q8TBC3 707 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 PGBD4Q96DM1 585 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 CXorf56Q9H5V9 222 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 ZNF358Q9NW07 568 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 PSMC3IPQ9P2W1 217 aaPredicted RBP10.38□□□□□ -0.75
TRO-208ENST00000420798 ZNFX1Q9P2E3 1918 aaKnown RBP10.38□□□□□ -0.75
TRO-208ENST00000420798 SDC4P31431 198 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 DCAF6Q58WW2 860 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 CELF3Q5SZQ8 465 aaKnown RBP10.38□□□□□ -0.75
TRO-208ENST00000420798 TRIM72Q6ZMU5 477 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 ARMCX2Q7L311 632 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 ZNF677Q86XU0 584 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 APOBEC3FQ8IUX4 373 aaKnown RBP10.38□□□□□ -0.75
TRO-208ENST00000420798 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRO-208ENST00000420798 MAGEB18Q96M61 343 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 NUDCD1Q96RS6 583 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 MED10Q9BTT4 135 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 ACKR2O00590 384 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 MYL2P10916 166 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 PAX7P23759 505 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 ALDH3A1P30838 453 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 MSX2P35548 267 aaPredicted RBP10.38□□□□□ -0.75
TRO-208ENST00000420798 FAM47CQ5HY64 1035 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 SPATA6LQ8N4H0 392 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 C12orf50Q8NA57 414 aaPredicted RBP10.38□□□□□ -0.75
TRO-208ENST00000420798 ATP11CQ8NB49 1132 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 MTMR14Q8NCE2 650 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 MCUR1Q96AQ8 359 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 HESX1Q9UBX0 185 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 RABGEF1Q9UJ41 708 aa10.38□□□□□ -0.75
TRO-208ENST00000420798 PIN4Q9Y237 131 aaKnown RBP10.38□□□□□ -0.75
TRO-208ENST00000420798 COPEO14579 308 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 ZC3H11AO75152 810 aaKnown RBP eCLIP10.37□□□□□ -0.75
TRO-208ENST00000420798 NEBLO76041 1014 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 METTL18O95568 372 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 GPD1P21695 349 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 MLH1P40692 756 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 RPL10AP62906 217 aaKnown RBP10.37□□□□□ -0.75
TRO-208ENST00000420798 TAF11Q15544 211 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 PPM1JQ5JR12 505 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 PPIL6Q8IXY8 311 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 PDCD7Q8N8D1 485 aaKnown RBP10.37□□□□□ -0.75
TRO-208ENST00000420798 EDEM1Q92611 657 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 FAM136AQ96C01 138 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 ZFP42Q96MM3 310 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 ZMAT2Q96NC0 199 aaKnown RBP10.37□□□□□ -0.75
TRO-208ENST00000420798 SIK2Q9H0K1 926 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 VPS11Q9H270 941 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 MANSC1Q9H8J5 431 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 MYH9P35579 1960 aaKnown RBP10.37□□□□□ -0.75
TRO-208ENST00000420798 ADGRA2Q96PE1 1338 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 MEIS3P2A8K0S8 358 aa10.37□□□□□ -0.75
TRO-208ENST00000420798 ZBTB42B2RXF5 422 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms