RNA–Protein interactions for RNA: ENST00000420717.5

PTPN18-204, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-204ENST00000420717 COL4A3Q01955 1670 aa15.22■□□□□ 0.03
PTPN18-204ENST00000420717 TRAV19A0A0A6YYK7 116 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 ARNTLO00327 626 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 FOXN3O00409 490 aaPredicted RBP15.21■□□□□ 0.03
PTPN18-204ENST00000420717 EPHB6O15197 1021 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 MED7O43513 233 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 PSMC3P17980 439 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 CLCN1P35523 988 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 KLK7P49862 253 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 BPIFB4P59827 614 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 UBXN1Q04323 297 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 USP4Q13107 963 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 DRAP1Q14919 205 aaPredicted RBP15.21■□□□□ 0.03
PTPN18-204ENST00000420717 ARHGAP44Q17R89 818 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 KLHDC10Q6PID8 442 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 CELF5Q8N6W0 485 aaKnown RBP15.21■□□□□ 0.03
PTPN18-204ENST00000420717 ZNF606Q8WXB4 792 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 DNASE1L2Q92874 299 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 USP13Q92995 863 aaPredicted RBP15.21■□□□□ 0.03
PTPN18-204ENST00000420717 ASIC4Q96FT7 647 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 HSFY1Q96LI6 401 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 KXD1Q9BQD3 176 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 RPP25Q9BUL9 199 aaKnown RBP15.21■□□□□ 0.03
PTPN18-204ENST00000420717 TSPY26PQ9H489 355 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 ARHGAP26Q9UNA1 814 aa15.21■□□□□ 0.03
PTPN18-204ENST00000420717 C2orf78A6NCI8 922 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 M0QYV0 167 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 TULP2O00295 520 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 CYP26A1O43174 497 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 USP17L7P0C7H9 530 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 AVPR1AP37288 418 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 GPD2P43304 727 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 PTK2Q05397 1052 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 NR1I3Q14994 352 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 ZNF77Q15935 545 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 BHLHA9Q7RTU4 235 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 MAB21L3Q8N8X9 362 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 SECISBP2LQ93073 1101 aaKnown RBP15.2■□□□□ 0.02
PTPN18-204ENST00000420717 SLC22A12Q96S37 553 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 PLA2G2FQ9BZM2 168 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 LHX5Q9H2C1 402 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 CNGB3Q9NQW8 809 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 TLR8Q9NR97 1041 aaKnown RBP15.2■□□□□ 0.02
PTPN18-204ENST00000420717 FAM207AQ9NSI2 230 aaPredicted RBP15.2■□□□□ 0.02
PTPN18-204ENST00000420717 TDP1Q9NUW8 608 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 CLIC5Q9NZA1 410 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 GMIPQ9P107 970 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 MYO6Q9UM54 1294 aa15.2■□□□□ 0.02
PTPN18-204ENST00000420717 HEPACAM2A8MVW5 462 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 GOLGA6L19H0YKK7 550 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 CDH5P33151 784 aaPredicted RBP15.19■□□□□ 0.02
PTPN18-204ENST00000420717 PBX1P40424 430 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 VIPR2P41587 438 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 MLLT6P55198 1093 aaPredicted RBP15.19■□□□□ 0.02
PTPN18-204ENST00000420717 RAPGEF1Q13905 1077 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 FILIP1LQ4L180 1135 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 FIGNQ5HY92 759 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 HECTD3Q5T447 861 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 TRIM67Q6ZTA4 783 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 BMP8AQ7Z5Y6 402 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 ARHGAP18Q8N392 663 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 NEK11Q8NG66 645 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 DDX1Q92499 740 aaKnown RBP15.19■□□□□ 0.02
PTPN18-204ENST00000420717 ZFRQ96KR1 1074 aaKnown RBP15.19■□□□□ 0.02
PTPN18-204ENST00000420717 LRRC3BQ96PB8 259 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 TTYH3Q9C0H2 523 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 SMOC2Q9H3U7 446 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 EPHX3Q9H6B9 360 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 ACP6Q9NPH0 428 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 C11orf16Q9NQ32 467 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 WNT16Q9UBV4 365 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 TICRRQ7Z2Z1 1910 aa15.19■□□□□ 0.02
PTPN18-204ENST00000420717 CHADO15335 359 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 TEX33O43247 280 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 THAP12O43422 761 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 NARSO43776 548 aaKnown RBP15.18■□□□□ 0.02
PTPN18-204ENST00000420717 GPR37L1O60883 481 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 GABBR2O75899 941 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 ZBED1O96006 694 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 CALCAP01258 141 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 CKMP06732 381 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 PNMA6AP0CW24 399 aaPredicted RBP15.18■□□□□ 0.02
PTPN18-204ENST00000420717 CYP11B1P15538 503 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 PGFP49763 221 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 TKTL1P51854 596 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 POLR2FP61218 127 aaKnown RBP15.18■□□□□ 0.02
PTPN18-204ENST00000420717 FANCCQ00597 558 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 PLCB2Q00722 1185 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 PFKPQ01813 784 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 ADIGQ0VDE8 80 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 ARHGAP29Q52LW3 1261 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 PMF1Q6P1K2 205 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 SCD5Q86SK9 330 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 SLC47A2Q86VL8 602 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 ZNF677Q86XU0 584 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 RIN3Q8TB24 985 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 UBA3Q8TBC4 463 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 BPIFB1Q8TDL5 484 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 EPS8L1Q8TE68 723 aa15.18■□□□□ 0.02
PTPN18-204ENST00000420717 IRGQQ8WZA9 623 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms