RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 TPRG1Q6ZUI0 275 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 ERMP1Q7Z2K6 904 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 KIAA1958Q8N8K9 716 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 SCAMP5Q8TAC9 235 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 SLC22A12Q96S37 553 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 INTS2Q9H0H0 1204 aaKnown RBP22.59■■□□□ 1.21
CPNE1-211ENST00000420363 HEBP1Q9NRV9 189 aa22.59■■□□□ 1.21
CPNE1-211ENST00000420363 COL4A3Q01955 1670 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 HHLA1C9JL84 531 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 MAN2B1O00754 1011 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 PAEPP09466 180 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 ACO1P21399 889 aaKnown RBP22.58■■□□□ 1.21
CPNE1-211ENST00000420363 MAGEA9P43362 315 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 SLC7A9P82251 487 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 IFRD2Q12894 506 aaPredicted RBP22.58■■□□□ 1.21
CPNE1-211ENST00000420363 MAN2A1Q16706 1144 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 SGO2Q562F6 1265 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 CSGALNACT1Q8TDX6 532 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 JAKMIP2Q96AA8 810 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 FAM81BQ96LP2 452 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 LTB4R2Q9NPC1 389 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 KIAA1257Q9ULG3 409 aa22.58■■□□□ 1.21
CPNE1-211ENST00000420363 CACNA1IQ9P0X4 2223 aa22.58■■□□□ 1.2
CPNE1-211ENST00000420363 ZNF292O60281 2723 aa22.58■■□□□ 1.2
CPNE1-211ENST00000420363 NCAM2O15394 837 aa22.57■■□□□ 1.2
CPNE1-211ENST00000420363 HDCP19113 662 aa22.57■■□□□ 1.2
CPNE1-211ENST00000420363 MTIF2P46199 727 aaKnown RBP22.57■■□□□ 1.2
CPNE1-211ENST00000420363 ZNF852Q6ZMS4 543 aa22.57■■□□□ 1.2
CPNE1-211ENST00000420363 MAML2Q8IZL2 1156 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-211ENST00000420363 ARL14EPQ8N8R7 260 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-211ENST00000420363 ANKRD52Q8NB46 1076 aa22.57■■□□□ 1.2
CPNE1-211ENST00000420363 UBXN6Q9BZV1 441 aa22.57■■□□□ 1.2
CPNE1-211ENST00000420363 C8orf33Q9H7E9 229 aaPredicted RBP22.57■■□□□ 1.2
CPNE1-211ENST00000420363 SCML2Q9UQR0 700 aa22.57■■□□□ 1.2
CPNE1-211ENST00000420363 MRPS17Q9Y2R5 130 aaKnown RBP22.57■■□□□ 1.2
CPNE1-211ENST00000420363 PIAS3Q9Y6X2 628 aa22.57■■□□□ 1.2
CPNE1-211ENST00000420363 F5P12259 2224 aa22.57■■□□□ 1.2
CPNE1-211ENST00000420363 VDRP11473 427 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 BCAT1P54687 386 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 SLC8A3P57103 927 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 MTF1Q14872 753 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 ZNF528Q3MIS6 628 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 TRIM65Q6PJ69 517 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 ENOSF1Q7L5Y1 443 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 GPRIN1Q7Z2K8 1008 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 GPIHBP1Q8IV16 184 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 ARHGEF19Q8IW93 802 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 KIAA2013Q8IYS2 634 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 RIN3Q8TB24 985 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 ENOX1Q8TC92 643 aaKnown RBP22.56■■□□□ 1.2
CPNE1-211ENST00000420363 RUBCNQ92622 972 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 CYP2S1Q96SQ9 504 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 FAM83CQ9BQN1 747 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 ANO10Q9NW15 660 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 FBXO4Q9UKT5 387 aa22.56■■□□□ 1.2
CPNE1-211ENST00000420363 SHISA7A6NL88 538 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 KIF11P52732 1056 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 ZNF132P52740 706 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 CSTF1Q05048 431 aaKnown RBP22.55■■□□□ 1.2
CPNE1-211ENST00000420363 PDGFRLQ15198 375 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 STILQ15468 1287 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 STX1AQ16623 288 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 EXOC3L4Q17RC7 722 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 CC2D1AQ6P1N0 951 aaPredicted RBP22.55■■□□□ 1.2
CPNE1-211ENST00000420363 TMEM270Q6UE05 265 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 SASS6Q6UVJ0 657 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 GBP6Q6ZN66 633 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 DDX42Q86XP3 938 aaKnown RBP eCLIP22.55■■□□□ 1.2
CPNE1-211ENST00000420363 KAT5Q92993 513 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 TLR8Q9NR97 1041 aaKnown RBP22.55■■□□□ 1.2
CPNE1-211ENST00000420363 GMIPQ9P107 970 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 TSPAN16Q9UKR8 245 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 CNTN6Q9UQ52 1028 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 USP3Q9Y6I4 520 aa22.55■■□□□ 1.2
CPNE1-211ENST00000420363 O00370 1275 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 EEF1GP26641 437 aaKnown RBP22.54■■□□□ 1.2
CPNE1-211ENST00000420363 HECTD3Q5T447 861 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 RRAGAQ7L523 313 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 CCDC186Q7Z3E2 898 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 TTC30AQ86WT1 665 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 CREBRFQ8IUR6 639 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 SH3RF2Q8TEC5 729 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 OSCP1Q8WVF1 389 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 ATRIPQ8WXE1 791 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 CLDN23Q96B33 292 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 ZFYVE19Q96K21 471 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 KREMEN1Q96MU8 473 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 HESX1Q9UBX0 185 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 APEX2Q9UBZ4 518 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 PCDHB4Q9Y5E5 795 aa22.54■■□□□ 1.2
CPNE1-211ENST00000420363 XPO1O14980 1071 aaKnown RBP22.53■■□□□ 1.2
CPNE1-211ENST00000420363 SETSIPP0DME0 302 aa22.53■■□□□ 1.2
CPNE1-211ENST00000420363 CD19P15391 556 aa22.53■■□□□ 1.2
CPNE1-211ENST00000420363 RPS9P46781 194 aaKnown RBP22.53■■□□□ 1.2
CPNE1-211ENST00000420363 PSEN1P49768 467 aa22.53■■□□□ 1.2
CPNE1-211ENST00000420363 BST2Q10589 180 aaKnown RBP22.53■■□□□ 1.2
CPNE1-211ENST00000420363 GOLGA7BQ2TAP0 167 aa22.53■■□□□ 1.2
CPNE1-211ENST00000420363 ITPRIPL2Q3MIP1 535 aa22.53■■□□□ 1.2
CPNE1-211ENST00000420363 RAB41Q5JT25 222 aa22.53■■□□□ 1.2
CPNE1-211ENST00000420363 RALGPS2Q86X27 583 aaPredicted RBP22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms