RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 DUSP16Q9BY84 665 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 FBXO44Q9H4M3 255 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 EBF3Q9H4W6 596 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 GMIPQ9P107 970 aa21.48■■□□□ 1.03
GTF3A-202ENST00000419181 CHORDC1Q9UHD1 332 aaPredicted RBP21.48■■□□□ 1.03
GTF3A-202ENST00000419181 OTOL1A6NHN0 477 aaPredicted RBP21.47■■□□□ 1.03
GTF3A-202ENST00000419181 AFPP02771 609 aaKnown RBP21.47■■□□□ 1.03
GTF3A-202ENST00000419181 TUBP50607 506 aa21.47■■□□□ 1.03
GTF3A-202ENST00000419181 RUNX3Q13761 415 aa21.47■■□□□ 1.03
GTF3A-202ENST00000419181 PDGFRLQ15198 375 aa21.47■■□□□ 1.03
GTF3A-202ENST00000419181 DPCR1Q3MIW9 517 aa21.47■■□□□ 1.03
GTF3A-202ENST00000419181 C1orf210Q8IVY1 113 aa21.47■■□□□ 1.03
GTF3A-202ENST00000419181 OSCP1Q8WVF1 389 aa21.47■■□□□ 1.03
GTF3A-202ENST00000419181 CNOT6LQ96LI5 555 aaKnown RBP21.47■■□□□ 1.03
GTF3A-202ENST00000419181 LEFTY2O00292 366 aa21.46■■□□□ 1.03
GTF3A-202ENST00000419181 ARSAP15289 507 aa21.46■■□□□ 1.03
GTF3A-202ENST00000419181 IRF2BP1Q8IU81 584 aa21.46■■□□□ 1.03
GTF3A-202ENST00000419181 TTC16Q8NEE8 873 aa21.46■■□□□ 1.03
GTF3A-202ENST00000419181 GPT2Q8TD30 523 aa21.46■■□□□ 1.03
GTF3A-202ENST00000419181 JAKMIP2Q96AA8 810 aa21.46■■□□□ 1.03
GTF3A-202ENST00000419181 DUS2Q9NX74 493 aaKnown RBP21.46■■□□□ 1.03
GTF3A-202ENST00000419181 SCML2Q9UQR0 700 aa21.46■■□□□ 1.03
GTF3A-202ENST00000419181 CPQQ9Y646 472 aa21.46■■□□□ 1.03
GTF3A-202ENST00000419181 WNT6Q9Y6F9 365 aa21.46■■□□□ 1.03
GTF3A-202ENST00000419181 MYO15AQ9UKN7 3530 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 COCHO43405 550 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 ACO1P21399 889 aaKnown RBP21.45■■□□□ 1.02
GTF3A-202ENST00000419181 PGFP49763 221 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 HECTD3Q5T447 861 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 PPM1KQ8N3J5 372 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 KIAA1958Q8N8K9 716 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 EHBP1Q8NDI1 1231 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 KAT5Q92993 513 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 CHFRQ96EP1 664 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 CHRDQ9H2X0 955 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 CCSER2Q9H7U1 834 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 SMPD4Q9NXE4 827 aa21.45■■□□□ 1.02
GTF3A-202ENST00000419181 CYP26A1O43174 497 aa21.44■■□□□ 1.02
GTF3A-202ENST00000419181 MBL2P11226 248 aaPredicted RBP21.44■■□□□ 1.02
GTF3A-202ENST00000419181 CHRNB1P11230 501 aa21.44■■□□□ 1.02
GTF3A-202ENST00000419181 IFNAR2P48551 515 aa21.44■■□□□ 1.02
GTF3A-202ENST00000419181 KIF11P52732 1056 aa21.44■■□□□ 1.02
GTF3A-202ENST00000419181 GCNT1Q02742 428 aa21.44■■□□□ 1.02
GTF3A-202ENST00000419181 EML3Q32P44 896 aa21.44■■□□□ 1.02
GTF3A-202ENST00000419181 MAML2Q8IZL2 1156 aaPredicted RBP21.44■■□□□ 1.02
GTF3A-202ENST00000419181 ANKRD52Q8NB46 1076 aa21.44■■□□□ 1.02
GTF3A-202ENST00000419181 ATP2A3Q93084 1043 aa21.44■■□□□ 1.02
GTF3A-202ENST00000419181 ZFRQ96KR1 1074 aaKnown RBP21.44■■□□□ 1.02
GTF3A-202ENST00000419181 ECT2Q9H8V3 914 aa21.44■■□□□ 1.02
GTF3A-202ENST00000419181 LMAN1LQ9HAT1 526 aa21.44■■□□□ 1.02
GTF3A-202ENST00000419181 TLR8Q9NR97 1041 aaKnown RBP21.44■■□□□ 1.02
GTF3A-202ENST00000419181 SPATA6Q9NWH7 488 aaPredicted RBP21.44■■□□□ 1.02
GTF3A-202ENST00000419181 ERCC5P28715 1186 aaPredicted RBP21.43■■□□□ 1.02
GTF3A-202ENST00000419181 SGO2Q562F6 1265 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 TMEM270Q6UE05 265 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 TTC30AQ86WT1 665 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 DDX42Q86XP3 938 aaKnown RBP eCLIP21.43■■□□□ 1.02
GTF3A-202ENST00000419181 ARHGEF19Q8IW93 802 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 CPA6Q8N4T0 437 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 UBXN6Q9BZV1 441 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 INTS2Q9H0H0 1204 aaKnown RBP21.43■■□□□ 1.02
GTF3A-202ENST00000419181 LINC00597Q9H2U6 94 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 CYLDQ9NQC7 956 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 DACH1Q9UI36 760 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 USP3Q9Y6I4 520 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 VPS13AQ96RL7 3174 aa21.43■■□□□ 1.02
GTF3A-202ENST00000419181 GOLGA6L22H0YM25 854 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 TLR5O60602 858 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 PAEPP09466 180 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 CD19P15391 556 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 NBL1P41271 181 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 MTAPQ13126 283 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 PON2Q15165 354 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 GOLGA7BQ2TAP0 167 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 RBM43Q6ZSC3 357 aaKnown RBP21.42■■□□□ 1.02
GTF3A-202ENST00000419181 RRAGAQ7L523 313 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 CCDC186Q7Z3E2 898 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 IER2Q9BTL4 223 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 OSER1Q9NX31 292 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 CFAP97Q9P2B7 532 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 TSPAN16Q9UKR8 245 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 KIAA1257Q9ULG3 409 aa21.42■■□□□ 1.02
GTF3A-202ENST00000419181 FANCMQ8IYD8 2048 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 O00370 1275 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 LAMTOR5O43504 91 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 GFRA3O60609 400 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 VDRP11473 427 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 GJA4P35212 333 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 BCAT1P54687 386 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 SLC8A3P57103 927 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 CCINQ13939 588 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 LRRC32Q14392 662 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 TPD52L1Q16890 204 aaPredicted RBP21.41■■□□□ 1.02
GTF3A-202ENST00000419181 RAB41Q5JT25 222 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 DGKKQ5KSL6 1271 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 MAMSTRQ6ZN01 415 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 PIGZQ86VD9 579 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 CREBRFQ8IUR6 639 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 KREMEN1Q96MU8 473 aa21.41■■□□□ 1.02
GTF3A-202ENST00000419181 THAP9Q9H5L6 903 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms