RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	GLRB	P48167	497 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	MARCKSL1	P49006	195 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	C1QBP	Q07021	282 aa	Known RBP	13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	BMPR2	Q13873	1038 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	PTGIS	Q16647	500 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	KLRG1	Q96E93	195 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	SYT15	Q9BQS2	421 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	TRIM4	Q9C037	500 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	STOML1	Q9UBI4	398 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	CCDC22	O60826	627 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	E2F6	O75461	281 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	FAM107A	O95990	144 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	GEMIN4	P57678	1058 aa	Known RBP	13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	EFTUD2	Q15029	972 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	TREML2	Q5T2D2	321 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	BTNL9	Q6UXG8	535 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	TRPM8	Q7Z2W7	1104 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	DDX53	Q86TM3	631 aa	Known RBP	13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	RIOX2	Q8IUF8	465 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	EGFL6	Q8IUX8	553 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	BAP1	Q92560	729 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	UNK	Q9C0B0	810 aa	Known RBP	13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	ZCWPW1	Q9H0M4	648 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	ASB7	Q9H672	318 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	CYP3A43	Q9HB55	503 aa		13.72	□□□□□ -0.21
BDNF-208	ENST00000418212	ESRRB	O95718	433 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	SYF2	O95926	243 aa	Known RBP	13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	ZSCAN5DP	P0CG00	497 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	SSTR1	P30872	391 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	RAD23B	P54727	409 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	CAPS	Q13938	189 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	CCNG2	Q16589	344 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	LLGL2	Q6P1M3	1020 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	TFAP2D	Q7Z6R9	452 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	TINF2	Q9BSI4	451 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	KCTD10	Q9H3F6	313 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	SCOC	Q9UIL1	159 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	DNPEP	Q9ULA0	475 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	PQBP1	O60828	265 aa	Known RBP	13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	PIAS1	O75925	651 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	EIF4B	P23588	611 aa	Known RBP	13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	GTF2B	Q00403	316 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	MAPRE1	Q15691	268 aa	Known RBP	13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	CHI3L2	Q15782	390 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	OVOS1	Q6IE37	1185 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	NAPEPLD	Q6IQ20	393 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	GPR63	Q9BZJ6	419 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	ATXN3L	Q9H3M9	355 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	DNAJC18	Q9H819	358 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	VTA1	Q9NP79	307 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	CHST12	Q9NRB3	414 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	MCF2	P10911	925 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	TCN1	P20061	433 aa	Predicted RBP	13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	CHRM3	P20309	590 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	RPL21	P46778	160 aa	Known RBP	13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	ANKRD20A4	Q4UJ75	823 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	ANKRD20A8P	Q5CZ79	823 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	ANKRD20A2	Q5SQ80	823 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	ANKRD20A1	Q5TYW2	823 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	CYB5D1	Q6P9G0	228 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	TTC23L	Q6PF05	361 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	SHCBP1	Q8NEM2	672 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	SPATA20	Q8TB22	786 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	THTPA	Q9BU02	230 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	TRPV6	Q9H1D0	765 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	XAB2	Q9HCS7	855 aa	Known RBP	13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	XPNPEP3	Q9NQH7	507 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	SMPD4	Q9NXE4	827 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	SH3BP1	Q9Y3L3	701 aa		13.71	□□□□□ -0.21
BDNF-208	ENST00000418212	AIM2	O14862	343 aa		13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	NFIC	P08651	508 aa		13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	SNHG28	P0DPA3	235 aa		13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	AMPD1	P23109	780 aa		13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	MIP	P30301	263 aa		13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	MFSD10	Q14728	455 aa		13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	MYCBPAP	Q8TBZ2	947 aa		13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	E2F7	Q96AV8	911 aa		13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	SH3KBP1	Q96B97	665 aa		13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	TMA16	Q96EY4	203 aa	Known RBP	13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	VPS33B	Q9H267	617 aa		13.71	□□□□□ -0.22
BDNF-208	ENST00000418212	SLC12A8	A0AV02	714 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	USP12	O75317	370 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	DGKI	O75912	1065 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	LSM8	O95777	96 aa	Known RBP	13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	CCNE2	O96020	404 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	FSCN1	Q16658	493 aa	Known RBP	13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	LAYN	Q6UX15	382 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	FAM96A	Q9H5X1	160 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	SCAMP3	O14828	347 aa	Known RBP	13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	ALDH1A1	P00352	501 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	SERPINB9	P50453	376 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	MCL1	Q07820	350 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	BST2	Q10589	180 aa	Known RBP	13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	PCSK9	Q8NBP7	692 aa	Known RBP	13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	STKLD1	Q8NE28	680 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	RFWD2	Q8NHY2	731 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	TRIM54	Q9BYV2	358 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	GRID1	Q9ULK0	1009 aa		13.7	□□□□□ -0.22
BDNF-208	ENST00000418212	CNTNAP2	Q9UHC6	1331 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms