RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 SPTLC1O15269 473 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 SLU7O95391 586 aaKnown RBP13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 EFEMP2O95967 443 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 LMNAP02545 664 aaKnown RBP13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 CYP1A2P05177 515 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 CALB1P05937 261 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 PDGFRBP09619 1106 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 SRFP11831 508 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 DNA2P51530 1060 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 CLCNKBP51801 687 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 STILQ15468 1287 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 SOWAHAQ2M3V2 549 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 DENND1BQ6P3S1 775 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 MMS22LQ6ZRQ5 1243 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 PEX26Q7Z412 305 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 PHLDB2Q86SQ0 1253 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 ERICH1Q86X53 443 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 ADGRF2Q8IZF7 708 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 TOP6BLQ8N6T0 577 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 C1orf131Q8NDD1 294 aaKnown RBP13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 GSTCDQ8NEC7 633 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 ST13P5Q8NFI4 369 aaPredicted RBP13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 MYRIPQ8NFW9 859 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 ZNF564Q8TBZ8 553 aaPredicted RBP13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 GPR152Q8TDT2 470 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 RABGGTAQ92696 567 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 B3GALT6Q96L58 329 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 SENP8Q96LD8 212 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 UROC1Q96N76 676 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 RHOBTB2Q9BYZ6 727 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 SYNCQ9H7C4 482 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 OSGEPQ9NPF4 335 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 UVRAGQ9P2Y5 699 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 CACNG4Q9UBN1 327 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 CHORDC1Q9UHD1 332 aaPredicted RBP13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 DPP7Q9UHL4 492 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 AMFRQ9UKV5 643 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 L1RE1Q9UN81 338 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 HYOU1Q9Y4L1 999 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 MRFAP1Q9Y605 127 aa13.89□□□□□ -0.19
HLA-DMB-258ENST00000418107 MICAL2O94851 1124 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 DCNP07585 359 aaKnown RBP13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 DSG1Q02413 1049 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 C1QBPQ07021 282 aaKnown RBP13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 DSC1Q08554 894 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 TUSC3Q13454 348 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 RPS6KA1Q15418 735 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 CNGA2Q16280 664 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 PAPD7Q5XG87 772 aaKnown RBP13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 GET4Q7L5D6 327 aaPredicted RBP13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 PHF13Q86YI8 300 aaPredicted RBP13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 KIAA2013Q8IYS2 634 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 RMDN1Q96DB5 314 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 VCPIP1Q96JH7 1222 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 LHX5Q9H2C1 402 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 L2HGDHQ9H9P8 463 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 PIDD1Q9HB75 910 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 AVENQ9NQS1 362 aaPredicted RBP13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 HESX1Q9UBX0 185 aa13.88□□□□□ -0.19
HLA-DMB-258ENST00000418107 DOCK8Q8NF50 2099 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 UQCRHLA0A096LP55 91 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 TGM5O43548 720 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 B3GAT3O94766 335 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 UQCRHP07919 91 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 WARSP23381 471 aaKnown RBP13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 MESDQ14696 234 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 WHAMMP3Q1A5X7 153 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 GOLGA7BQ2TAP0 167 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 C2CD6Q53TS8 623 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 WSCD1Q658N2 575 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 MON1BQ7L1V2 547 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 METTL23Q86XA0 190 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 PDCL2Q8N4E4 241 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 CEP112Q8N8E3 955 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 UBA3Q8TBC4 463 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 NXPE3Q969Y0 559 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 TNIP3Q96KP6 325 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 CAPZA3Q96KX2 299 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 ZSWIM1Q9BR11 485 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 CARD6Q9BX69 1037 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 SEMA4AQ9H3S1 761 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 MRPL47Q9HD33 250 aaKnown RBP13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 ARHGEF3Q9NR81 526 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 FAM49BQ9NUQ9 324 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 SCINQ9Y6U3 715 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 FRYLO94915 3013 aa13.87□□□□□ -0.19
HLA-DMB-258ENST00000418107 ARHGEF37A1IGU5 675 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 O00370 1275 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 BUB1BO60566 1050 aaPredicted RBP13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 FAM163BP0C2L3 166 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 ODC1P11926 461 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 LAMP2P13473 410 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 TCP1P17987 556 aaKnown RBP13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 RPL17P18621 184 aaKnown RBP13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 PAX3P23760 479 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 RRM1P23921 792 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 TERF1P54274 439 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 HTR4Q13639 388 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 TCEAL1Q15170 157 aa13.86□□□□□ -0.19
HLA-DMB-258ENST00000418107 UPP1Q16831 310 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms