RNA–Protein interactions for RNA: ENST00000417658.5

PRPF18-203, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 1,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-203ENST00000417658 PLXND1Q9Y4D7 1925 aa17.4■□□□□ 0.38
PRPF18-203ENST00000417658 TNRC6BQ9UPQ9 1833 aaKnown RBP17.4■□□□□ 0.38
PRPF18-203ENST00000417658 FASNP49327 2511 aaKnown RBP17.4■□□□□ 0.38
PRPF18-203ENST00000417658 AP5Z1O43299 807 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 TACC1O75410 805 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 SERPINF2P08697 491 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 IDEP14735 1019 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 ITPKAP23677 461 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 TXLNAP40222 546 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 GAD2Q05329 585 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 GFPT1Q06210 699 aaPredicted RBP17.39■□□□□ 0.37
PRPF18-203ENST00000417658 SLC36A4Q6YBV0 504 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 NUDT18Q6ZVK8 323 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 TRMT11Q7Z4G4 463 aaKnown RBP17.39■□□□□ 0.37
PRPF18-203ENST00000417658 RABEPKQ7Z6M1 372 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 C12orf40Q86WS4 652 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 WDR49Q8IV35 697 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 PGBD3Q8N328 593 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 PHTF2Q8N3S3 785 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 HDDC3Q8N4P3 179 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 NOC3LQ8WTT2 800 aaKnown RBP17.39■□□□□ 0.37
PRPF18-203ENST00000417658 DUSP9Q99956 384 aaKnown RBP17.39■□□□□ 0.37
PRPF18-203ENST00000417658 SNX25Q9H3E2 840 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 KIAA1586Q9HCI6 787 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 PANK4Q9NVE7 773 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 PTPRJQ12913 1337 aa17.39■□□□□ 0.37
PRPF18-203ENST00000417658 DMXL2Q8TDJ6 3036 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 TCRBV21S2A2A0A5A6 115 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 TBC1D3BA6NDS4 549 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 CFIP05156 583 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 MBL2P11226 248 aaPredicted RBP17.38■□□□□ 0.37
PRPF18-203ENST00000417658 HOXB3P14651 431 aaPredicted RBP17.38■□□□□ 0.37
PRPF18-203ENST00000417658 ATXN3P54252 364 aaPredicted RBP17.38■□□□□ 0.37
PRPF18-203ENST00000417658 HNRNPDQ14103 355 aaKnown RBP17.38■□□□□ 0.37
PRPF18-203ENST00000417658 MDH1BQ5I0G3 518 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 LY6G5CQ5SRR4 150 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 KIAA1211LQ6NV74 962 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 CCDC73Q6ZRK6 1079 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 HS2ST1Q7LGA3 356 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 ETFBKMTQ8IXQ9 262 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 PDZD8Q8NEN9 1154 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 OVCA2Q8WZ82 227 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 ELOVL4Q9GZR5 314 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 CAPN10Q9HC96 672 aa17.38■□□□□ 0.37
PRPF18-203ENST00000417658 FBXO2Q9UK22 296 aaPredicted RBP17.38■□□□□ 0.37
PRPF18-203ENST00000417658 SPAARA0A1B0GVQ0 90 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 PRPF6O94906 941 aaKnown RBP17.37■□□□□ 0.37
PRPF18-203ENST00000417658 RTN3O95197 1032 aaPredicted RBP17.37■□□□□ 0.37
PRPF18-203ENST00000417658 PTPN1P18031 435 aaKnown RBP17.37■□□□□ 0.37
PRPF18-203ENST00000417658 YWHAQP27348 245 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 RING1Q06587 406 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 SNX30Q5VWJ9 437 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 BTBD8Q5XKL5 378 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 STXBP4Q6ZWJ1 553 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 TRAPPC11Q7Z392 1133 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 CBWD2Q8IUF1 395 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 NUP93Q8N1F7 819 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 MRPL45Q9BRJ2 306 aaKnown RBP17.37■□□□□ 0.37
PRPF18-203ENST00000417658 FGFBP2Q9BYJ0 223 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 DEC1Q9P2X7 70 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 KLK13Q9UKR3 277 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 STARD13Q9Y3M8 1113 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 CLIC4Q9Y696 253 aa17.37■□□□□ 0.37
PRPF18-203ENST00000417658 SCAMP3O14828 347 aaKnown RBP17.36■□□□□ 0.37
PRPF18-203ENST00000417658 HOXC11O43248 304 aaPredicted RBP17.36■□□□□ 0.37
PRPF18-203ENST00000417658 OPHN1O60890 802 aa17.36■□□□□ 0.37
PRPF18-203ENST00000417658 CD2BP2O95400 341 aaKnown RBP17.36■□□□□ 0.37
PRPF18-203ENST00000417658 CST3P01034 146 aaPredicted RBP17.36■□□□□ 0.37
PRPF18-203ENST00000417658 GABRG2P18507 467 aa17.36■□□□□ 0.37
PRPF18-203ENST00000417658 RPL6Q02878 288 aaKnown RBP17.36■□□□□ 0.37
PRPF18-203ENST00000417658 KDSRQ06136 332 aa17.36■□□□□ 0.37
PRPF18-203ENST00000417658 ACAP1Q15027 740 aa17.36■□□□□ 0.37
PRPF18-203ENST00000417658 ZNF513Q8N8E2 541 aaPredicted RBP17.36■□□□□ 0.37
PRPF18-203ENST00000417658 OR6B3Q8NGW1 331 aa17.36■□□□□ 0.37
PRPF18-203ENST00000417658 ZFRQ96KR1 1074 aaKnown RBP17.36■□□□□ 0.37
PRPF18-203ENST00000417658 ZDHHC4Q9NPG8 344 aa17.36■□□□□ 0.37
PRPF18-203ENST00000417658 TMEM30AQ9NV96 361 aa17.36■□□□□ 0.37
PRPF18-203ENST00000417658 LHX6Q9UPM6 363 aa17.36■□□□□ 0.37
PRPF18-203ENST00000417658 NME7Q9Y5B8 376 aa17.36■□□□□ 0.37
PRPF18-203ENST00000417658 DSPP15924 2871 aaKnown RBP17.35■□□□□ 0.37
PRPF18-203ENST00000417658 ARHGAP33O14559 1287 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 ZBTB24O43167 697 aaPredicted RBP17.35■□□□□ 0.37
PRPF18-203ENST00000417658 COCHO43405 550 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 ZNF217O75362 1048 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 TULP3O75386 442 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 TUBP50607 506 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 CACNA2D1P54289 1103 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 ZNF33AQ06730 810 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 SLC14A1Q13336 389 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 ZNF423Q2M1K9 1284 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 C8orf34Q49A92 452 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 HECTD3Q5T447 861 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 CCDC65Q8IXS2 484 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 CLIC6Q96NY7 704 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 GTPBP2Q9BX10 602 aaKnown RBP17.35■□□□□ 0.37
PRPF18-203ENST00000417658 ZNF518BQ9C0D4 1074 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 DNAAF2Q9NVR5 837 aaKnown RBP17.35■□□□□ 0.37
PRPF18-203ENST00000417658 IL37Q9NZH6 218 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 HSPBP1Q9NZL4 362 aa17.35■□□□□ 0.37
PRPF18-203ENST00000417658 A0A1W2PQD8 194 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms