RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 DENND1BQ6P3S1 775 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 MAMSTRQ6ZN01 415 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 SLC47A2Q86VL8 602 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 MON1AQ86VX9 555 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 ARID3BQ8IVW6 561 aaPredicted RBP13.16□□□□□ -0.3
SKA1-203ENST00000417656 FAM71AQ8IYT1 594 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 CMTM8Q8IZV2 173 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 PDZD8Q8NEN9 1154 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 SLC22A12Q96S37 553 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 STK33Q9BYT3 514 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 PLA2G2FQ9BZM2 168 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 FBXO44Q9H4M3 255 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 COMMD8Q9NX08 183 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 MYO10Q9HD67 2058 aa13.16□□□□□ -0.3
SKA1-203ENST00000417656 TRAV19A0A0A6YYK7 116 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 MED7O43513 233 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 CKMP06732 381 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 CLCN1P35523 988 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 AVPR1AP37288 418 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 PGFP49763 221 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 TKTL1P51854 596 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 JAM2P57087 298 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 PTK2Q05397 1052 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 ADIGQ0VDE8 80 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 RAB41Q5JT25 222 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 VITQ6UXI7 678 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 PASD1Q8IV76 773 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 SLC44A3Q8N4M1 653 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 ARL14EPQ8N8R7 260 aaPredicted RBP13.15□□□□□ -0.3
SKA1-203ENST00000417656 ZNF606Q8WXB4 792 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 OVCA2Q8WZ82 227 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 NXPE3Q969Y0 559 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 ELSPBP1Q96BH3 223 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 SPAG5Q96R06 1193 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 TRPV4Q9HBA0 871 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 ZFP14Q9HCL3 533 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 ZMYM5Q9UJ78 669 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 DUSP12Q9UNI6 340 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 SCML2Q9UQR0 700 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 CCL26Q9Y258 94 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 DAAM1Q9Y4D1 1078 aa13.15□□□□□ -0.3
SKA1-203ENST00000417656 TICRRQ7Z2Z1 1910 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 A0A1W2PQH9 124 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 HEPACAM2A8MVW5 462 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 PIK3R2O00459 728 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 GFPT2O94808 682 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 OAS1P00973 400 aaKnown RBP13.14□□□□□ -0.31
SKA1-203ENST00000417656 ZDHHC11BP0C7U3 371 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 PPP3CCP48454 512 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 ZXDAP98168 799 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 PMF1Q6P1K2 205 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 CCDC186Q7Z3E2 898 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 RIN3Q8TB24 985 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 SLC35F5Q8WV83 523 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 USP13Q92995 863 aaPredicted RBP13.14□□□□□ -0.31
SKA1-203ENST00000417656 CYP2S1Q96SQ9 504 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 ULBP1Q9BZM6 244 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 UBXN6Q9BZV1 441 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 EPHX3Q9H6B9 360 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 CCSER2Q9H7U1 834 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 NMUR1Q9HB89 426 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 LRRC4Q9HBW1 653 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 IFNKQ9P0W0 207 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 CHORDC1Q9UHD1 332 aaPredicted RBP13.14□□□□□ -0.31
SKA1-203ENST00000417656 USP3Q9Y6I4 520 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 COL4A3Q01955 1670 aa13.14□□□□□ -0.31
SKA1-203ENST00000417656 MUC3AQ02505 3323 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 A0A1W2PQC6 194 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 SOBPA7XYQ1 873 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 DPYSL4O14531 572 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 MAP3K13O43283 966 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 OLFM2O95897 454 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 USP17L7P0C7H9 530 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 SRFP11831 508 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 ALADP13716 330 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 LCP1P13796 627 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 CYP11B1P15538 503 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 WEE1P30291 646 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 SOX5P35711 763 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 GPD2P43304 727 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 PDE6CP51160 858 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 UBASH3AP57075 661 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 USP4Q13107 963 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 NR1I3Q14994 352 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 MEA1Q16626 185 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 TAF3Q5VWG9 929 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 SMYD5Q6GMV2 418 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 SCD5Q86SK9 330 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 NOP9Q86U38 636 aaKnown RBP13.13□□□□□ -0.31
SKA1-203ENST00000417656 UBALD2Q8IYN6 164 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 SIX6OS1Q8N1H7 587 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 C1orf131Q8NDD1 294 aaKnown RBP13.13□□□□□ -0.31
SKA1-203ENST00000417656 TTC16Q8NEE8 873 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 EPS8L1Q8TE68 723 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 DEPDC1BQ8WUY9 529 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 KCTD13Q8WZ19 329 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 NDRG1Q92597 394 aaKnown RBP13.13□□□□□ -0.31
SKA1-203ENST00000417656 LRRC3BQ96PB8 259 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 KIF9Q9HAQ2 790 aa13.13□□□□□ -0.31
SKA1-203ENST00000417656 TLR8Q9NR97 1041 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms