RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 INTS8Q75QN2 995 aaKnown RBP16.02■□□□□ 0.16
UBXN4-203ENST00000416538 FILIP1Q7Z7B0 1213 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 SFTPA1Q8IWL2 248 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 ABCA7Q8IZY2 2146 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 CRYBG2Q8N1P7 616 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 ATP2A3Q93084 1043 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 FBXO32Q969P5 355 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 CCDC47Q96A33 483 aaKnown RBP16.02■□□□□ 0.16
UBXN4-203ENST00000416538 TNIP3Q96KP6 325 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 MED10Q9BTT4 135 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 CCSER2Q9H7U1 834 aa16.02■□□□□ 0.16
UBXN4-203ENST00000416538 PLXND1Q9Y4D7 1925 aa16.02■□□□□ 0.15
UBXN4-203ENST00000416538 TNRC6BQ9UPQ9 1833 aaKnown RBP16.01■□□□□ 0.15
UBXN4-203ENST00000416538 ATP8B3O60423 1300 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 HHLA1C9JL84 531 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 COCHO43405 550 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 ZDHHC11BP0C7U3 371 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 ADORA2BP29275 332 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 PRCPP42785 496 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 ID4P47928 161 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 GRSF1Q12849 480 aaKnown RBP eCLIP16.01■□□□□ 0.15
UBXN4-203ENST00000416538 ADAM9Q13443 819 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 EDRF1Q3B7T1 1238 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 C12orf40Q86WS4 652 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 ZC3H3Q8IXZ2 948 aaKnown RBP16.01■□□□□ 0.15
UBXN4-203ENST00000416538 TAF4BQ92750 862 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 CD101Q93033 1021 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 SLITRK1Q96PX8 696 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 ARID3AQ99856 593 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 NIF3L1Q9GZT8 377 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 CSNK1G1Q9HCP0 422 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 CFAP97Q9P2B7 532 aa16.01■□□□□ 0.15
UBXN4-203ENST00000416538 TRIM49BA6NDI0 452 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 CILPO75339 1184 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 RTN3O95197 1032 aaPredicted RBP16■□□□□ 0.15
UBXN4-203ENST00000416538 KIF20AO95235 890 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 MBL2P11226 248 aaPredicted RBP16■□□□□ 0.15
UBXN4-203ENST00000416538 CD58P19256 250 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 HOXA6P31267 233 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 PSMC2P35998 433 aaKnown RBP16■□□□□ 0.15
UBXN4-203ENST00000416538 PPP3CCP48454 512 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 NRLP54845 237 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 MAP3K7CLP57077 242 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 PPP2R5DQ14738 602 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 PRR23BQ6ZRT6 265 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 CLEC20AQ6ZU45 233 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 LONP2Q86WA8 852 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 UNC93AQ86WB7 457 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 RPLP0P6Q8NHW5 317 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 SPATA20Q8TB22 786 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 JAKMIP2Q96AA8 810 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 HHIPQ96QV1 700 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 TMEM8AQ9HCN3 771 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 OSER1Q9NX31 292 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 EHD2Q9NZN4 543 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 CHORDC1Q9UHD1 332 aaPredicted RBP16■□□□□ 0.15
UBXN4-203ENST00000416538 THADAQ6YHU6 1953 aa16■□□□□ 0.15
UBXN4-203ENST00000416538 NCOR2Q9Y618 2525 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 NFATC1O95644 943 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 KRT13P13646 458 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 P4HA1P13674 534 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 DRD1P21728 446 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 PDE6CP51160 858 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 ENPEPQ07075 957 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 CBWD6Q4V339 395 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 CBWD3Q5JTY5 395 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 CBWD5Q5RIA9 395 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 SNX30Q5VWJ9 437 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 WDR5BQ86VZ2 330 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 OVCA2Q8WZ82 227 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 PCDHA5Q9Y5H7 936 aa15.99■□□□□ 0.15
UBXN4-203ENST00000416538 CEP192Q8TEP8 1941 aa15.98■□□□□ 0.15
UBXN4-203ENST00000416538 CYP26A1O43174 497 aa15.98■□□□□ 0.15
UBXN4-203ENST00000416538 RPL13P26373 211 aaKnown RBP15.98■□□□□ 0.15
UBXN4-203ENST00000416538 MXI1P50539 228 aa15.98■□□□□ 0.15
UBXN4-203ENST00000416538 SPEM2Q0P670 501 aa15.98■□□□□ 0.15
UBXN4-203ENST00000416538 SIM2Q14190 667 aaPredicted RBP15.98■□□□□ 0.15
UBXN4-203ENST00000416538 DHCR24Q15392 516 aa15.98■□□□□ 0.15
UBXN4-203ENST00000416538 COBLL1Q53SF7 1204 aa15.98■□□□□ 0.15
UBXN4-203ENST00000416538 ZNF658Q5TYW1 1059 aaPredicted RBP15.98■□□□□ 0.15
UBXN4-203ENST00000416538 LAIR1Q6GTX8 287 aa15.98■□□□□ 0.15
UBXN4-203ENST00000416538 RHBDF2Q6PJF5 856 aa15.98■□□□□ 0.15
UBXN4-203ENST00000416538 PDZD8Q8NEN9 1154 aa15.98■□□□□ 0.15
UBXN4-203ENST00000416538 HNRNPABQ99729 332 aaKnown RBP15.98■□□□□ 0.15
UBXN4-203ENST00000416538 NMUR1Q9HB89 426 aa15.98■□□□□ 0.15
UBXN4-203ENST00000416538 K7EQS6 105 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 GREM1O60565 184 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 TBX18O95935 607 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 FAM200BP0CF97 657 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 HNRNPLP14866 589 aaKnown RBP eCLIP15.97■□□□□ 0.15
UBXN4-203ENST00000416538 SLC6A11P48066 632 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 TUBP50607 506 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 BECN1Q14457 450 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 ZNF394Q53GI3 561 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 HECTD3Q5T447 861 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 PPP1R26Q5T8A7 1209 aaPredicted RBP15.97■□□□□ 0.15
UBXN4-203ENST00000416538 KRT39Q6A163 491 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 ANKRD40Q6AI12 368 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 BBS7Q8IWZ6 715 aa15.97■□□□□ 0.15
UBXN4-203ENST00000416538 ADGRG2Q8IZP9 1017 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms