RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 AVPR1AP37288 418 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 MAPK10P53779 464 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 TTC39BQ5VTQ0 682 aaPredicted RBP13.35□□□□□ -0.27
SCN1B-202ENST00000415950 ECHDC2Q86YB7 292 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 SHCBP1Q8NEM2 672 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 SEMA4DQ92854 862 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 MECRQ9BV79 373 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 PAK5Q9P286 719 aa13.35□□□□□ -0.27
SCN1B-202ENST00000415950 AJAP1Q9UKB5 411 aaPredicted RBP13.35□□□□□ -0.27
SCN1B-202ENST00000415950 GOLGA8TH3BQL2 631 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 DNALI1O14645 258 aaPredicted RBP13.34□□□□□ -0.27
SCN1B-202ENST00000415950 P4HA2O15460 535 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 SERPINB10P48595 397 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 DCAF6Q58WW2 860 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 XKR3Q5GH77 459 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 POTEAQ6S8J7 498 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.34□□□□□ -0.27
SCN1B-202ENST00000415950 FAM13CQ8NE31 585 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 PCDHB18PQ96TA0 734 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 ACAD9Q9H845 621 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 UBP1Q9NZI7 540 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 DCXO43602 365 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 NUDT17P0C025 328 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 SERPINB9P50453 376 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 CRADDP78560 199 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 ITGA9Q13797 1035 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 DENND5BQ6ZUT9 1274 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 PTF1AQ7RTS3 328 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 PCYOX1LQ8NBM8 494 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 SRPK1Q96SB4 655 aaKnown RBP13.34□□□□□ -0.27
SCN1B-202ENST00000415950 EML4Q9HC35 981 aaKnown RBP13.34□□□□□ -0.27
SCN1B-202ENST00000415950 PNMA8BQ9ULN7 279 aaPredicted RBP13.34□□□□□ -0.27
SCN1B-202ENST00000415950 SNX13Q9Y5W8 968 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 ITSN1Q15811 1721 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 MEIS2O14770 477 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 RASSF9O75901 435 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 USP1O94782 785 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 SPATA31C1P0DKV0 1188 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 PTPN7P35236 360 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 PDAP1Q13442 181 aaKnown RBP13.34□□□□□ -0.27
SCN1B-202ENST00000415950 FASTKD3Q14CZ7 662 aaKnown RBP13.34□□□□□ -0.27
SCN1B-202ENST00000415950 RNF219Q5W0B1 726 aaPredicted RBP13.34□□□□□ -0.27
SCN1B-202ENST00000415950 ZNF555Q8NEP9 628 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 OTUD5Q96G74 571 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 CLPTM1LQ96KA5 538 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 DCUN1D5Q9BTE7 237 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 FOXP3Q9BZS1 431 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 RERGLQ9H628 205 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 PDP2Q9P2J9 529 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 CES2O00748 559 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 C16orf89Q6UX73 402 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 EXD1Q8NHP7 514 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 LRRC15Q8TF66 581 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 PTPRHQ9HD43 1115 aa13.34□□□□□ -0.27
SCN1B-202ENST00000415950 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCN1B-202ENST00000415950 CLPTM1O96005 669 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 IREB2P48200 963 aaKnown RBP13.33□□□□□ -0.27
SCN1B-202ENST00000415950 ACAP1Q15027 740 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 SGSM1Q2NKQ1 1148 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 GLRA4Q5JXX5 417 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 C1orf186Q6ZWK4 172 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 HEATR4Q86WZ0 1026 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 RIN3Q8TB24 985 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 SH3KBP1Q96B97 665 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 OXNAD1Q96HP4 312 aaPredicted RBP13.33□□□□□ -0.27
SCN1B-202ENST00000415950 SMAD5Q99717 465 aaKnown RBP13.33□□□□□ -0.27
SCN1B-202ENST00000415950 NIF3L1Q9GZT8 377 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 CYP4F12Q9HCS2 524 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 PRDM5Q9NQX1 630 aaPredicted RBP13.33□□□□□ -0.27
SCN1B-202ENST00000415950 CISHQ9NSE2 258 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 CDYLQ9Y232 598 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 CDY2AQ9Y6F7 541 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 CDY1Q9Y6F8 540 aa13.33□□□□□ -0.27
SCN1B-202ENST00000415950 NWD1Q149M9 1564 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 C16orf96A6NNT2 1141 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 SRP72O76094 671 aaKnown RBP13.33□□□□□ -0.28
SCN1B-202ENST00000415950 POLBP06746 335 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 ADRB2P07550 413 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 GTF2H3Q13889 308 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 PTK2BQ14289 1009 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 FUT11Q495W5 492 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 USP6NLQ92738 828 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 CENPTQ96BT3 561 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 VPS50Q96JG6 964 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 MOV10L1Q9BXT6 1211 aaKnown RBP13.33□□□□□ -0.28
SCN1B-202ENST00000415950 KCND2Q9NZV8 630 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 WDR35Q9P2L0 1181 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 PIN4Q9Y237 131 aaKnown RBP13.33□□□□□ -0.28
SCN1B-202ENST00000415950 DPPA5A6NC42 116 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 PPP1R11O60927 126 aaPredicted RBP13.33□□□□□ -0.28
SCN1B-202ENST00000415950 AVILO75366 819 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 PMPCBO75439 489 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 ITGB3P05106 788 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 S100A5P33763 92 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 CYP24A1Q07973 514 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 TTLL4Q14679 1199 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 OTOAQ7RTW8 1153 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 LRRC57Q8N9N7 239 aa13.33□□□□□ -0.28
SCN1B-202ENST00000415950 ZSCAN18Q8TBC5 510 aaPredicted RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms