RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 PKD1L2Q7Z442 2459 aa16.4■□□□□ 0.22
DDX56-202ENST00000415758 CEP192Q8TEP8 1941 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 FAM221BA6H8Z2 402 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 CST3P01034 146 aaPredicted RBP16.39■□□□□ 0.21
DDX56-202ENST00000415758 MDH1BQ5I0G3 518 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 SNX30Q5VWJ9 437 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 LYSMD4Q5XG99 296 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 CBWD2Q8IUF1 395 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 ETFBKMTQ8IXQ9 262 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 CEP76Q8TAP6 659 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 NOC3LQ8WTT2 800 aaKnown RBP16.39■□□□□ 0.21
DDX56-202ENST00000415758 HMGB4Q8WW32 186 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 OVCA2Q8WZ82 227 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 MRPL45Q9BRJ2 306 aaKnown RBP16.39■□□□□ 0.21
DDX56-202ENST00000415758 ELOVL4Q9GZR5 314 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 TMEM30AQ9NV96 361 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 SMPD4Q9NXE4 827 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 BCCIPQ9P287 314 aaKnown RBP eCLIP16.39■□□□□ 0.21
DDX56-202ENST00000415758 DMXL2Q8TDJ6 3036 aa16.39■□□□□ 0.21
DDX56-202ENST00000415758 ABL1P00519 1130 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 MBL2P11226 248 aaPredicted RBP16.38■□□□□ 0.21
DDX56-202ENST00000415758 PTPN1P18031 435 aaKnown RBP16.38■□□□□ 0.21
DDX56-202ENST00000415758 ITPKAP23677 461 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 STAT6P42226 847 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 CACNA2D1P54289 1103 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 GAD2Q05329 585 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 DUOXA1Q1HG43 343 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 PREPLQ4J6C6 727 aaPredicted RBP16.38■□□□□ 0.21
DDX56-202ENST00000415758 LY6G5CQ5SRR4 150 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 STXBP4Q6ZWJ1 553 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 HS2ST1Q7LGA3 356 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 CCDC65Q8IXS2 484 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 NUP93Q8N1F7 819 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 PDZD8Q8NEN9 1154 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 ZFRQ96KR1 1074 aaKnown RBP16.38■□□□□ 0.21
DDX56-202ENST00000415758 SNX25Q9H3E2 840 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 HSPBP1Q9NZL4 362 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 SLC6A14Q9UN76 642 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 STARD13Q9Y3M8 1113 aa16.38■□□□□ 0.21
DDX56-202ENST00000415758 A0A087X0B3 334 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 TCRBV21S2A2A0A5A6 115 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 SCAMP3O14828 347 aaKnown RBP16.37■□□□□ 0.21
DDX56-202ENST00000415758 HOXC11O43248 304 aaPredicted RBP16.37■□□□□ 0.21
DDX56-202ENST00000415758 AP5Z1O43299 807 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 HYAL3O43820 417 aaPredicted RBP16.37■□□□□ 0.21
DDX56-202ENST00000415758 RTN3O95197 1032 aaPredicted RBP16.37■□□□□ 0.21
DDX56-202ENST00000415758 STAU1O95793 577 aaKnown RBP16.37■□□□□ 0.21
DDX56-202ENST00000415758 SERPINF2P08697 491 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 YWHAQP27348 245 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 HOXD13P35453 343 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 MAPK8P45983 427 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 COL9A2Q14055 689 aaPredicted RBP16.37■□□□□ 0.21
DDX56-202ENST00000415758 SLC36A4Q6YBV0 504 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 ARMCX6Q7L4S7 300 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 TRMT11Q7Z4G4 463 aaKnown RBP16.37■□□□□ 0.21
DDX56-202ENST00000415758 OR6B3Q8NGW1 331 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 ZCCHC14Q8WYQ9 949 aaKnown RBP16.37■□□□□ 0.21
DDX56-202ENST00000415758 CAPN10Q9HC96 672 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 IL37Q9NZH6 218 aa16.37■□□□□ 0.21
DDX56-202ENST00000415758 CIZ1Q9ULV3 898 aaPredicted RBP16.37■□□□□ 0.21
DDX56-202ENST00000415758 TBC1D3BA6NDS4 549 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 H0Y626 953 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 COCHO43405 550 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 TRIM16O95361 564 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 TUBP50607 506 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 SIM1P81133 766 aaPredicted RBP16.36■□□□□ 0.21
DDX56-202ENST00000415758 KDSRQ06136 332 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 WDR72Q3MJ13 1102 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 NUDT18Q6ZVK8 323 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 RABEPKQ7Z6M1 372 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 PGBD3Q8N328 593 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 B3GALNT2Q8NCR0 500 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 GLIS3Q8NEA6 775 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 ZNF507Q8TCN5 953 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 B3GNT5Q9BYG0 378 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 PANK2Q9BZ23 570 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 ZNF518BQ9C0D4 1074 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 DPEP3Q9H4B8 488 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 ZDHHC4Q9NPG8 344 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 DEC1Q9P2X7 70 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 HCN2Q9UL51 889 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 ADAMTS9Q9P2N4 1935 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 PCDH15Q96QU1 1955 aa16.36■□□□□ 0.21
DDX56-202ENST00000415758 SPAARA0A1B0GVQ0 90 aa16.35■□□□□ 0.21
DDX56-202ENST00000415758 FAM92AA1XBS5 289 aa16.35■□□□□ 0.21
DDX56-202ENST00000415758 EIF3DO15371 548 aaKnown RBP eCLIP16.35■□□□□ 0.21
DDX56-202ENST00000415758 TULP3O75386 442 aa16.35■□□□□ 0.21
DDX56-202ENST00000415758 HOXB3P14651 431 aaPredicted RBP16.35■□□□□ 0.21
DDX56-202ENST00000415758 GABRG2P18507 467 aa16.35■□□□□ 0.21
DDX56-202ENST00000415758 PDCP20941 246 aa16.35■□□□□ 0.21
DDX56-202ENST00000415758 GFPT1Q06210 699 aaPredicted RBP16.35■□□□□ 0.21
DDX56-202ENST00000415758 HNRNPDQ14103 355 aaKnown RBP16.35■□□□□ 0.21
DDX56-202ENST00000415758 PSMD6Q15008 389 aa16.35■□□□□ 0.21
DDX56-202ENST00000415758 SNRNP35Q16560 246 aaKnown RBP16.35■□□□□ 0.21
DDX56-202ENST00000415758 HECTD3Q5T447 861 aa16.35■□□□□ 0.21
DDX56-202ENST00000415758 BTBD8Q5XKL5 378 aa16.35■□□□□ 0.21
DDX56-202ENST00000415758 KIAA1211LQ6NV74 962 aa16.35■□□□□ 0.21
DDX56-202ENST00000415758 LRSAM1Q6UWE0 723 aa16.35■□□□□ 0.21
DDX56-202ENST00000415758 EPM2AIP1Q7L775 607 aaPredicted RBP16.35■□□□□ 0.21
DDX56-202ENST00000415758 HDDC3Q8N4P3 179 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms