RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 MIDNQ504T8 468 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 CNNM4Q6P4Q7 775 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 UBE3BQ7Z3V4 1068 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 KCNK18Q7Z418 384 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.05□□□□□ -1.92
LINC00428-201ENST00000415620 SMRP1Q8NCR6 262 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 STON2Q8WXE9 905 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 LPIN2Q92539 896 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 HMCESQ96FZ2 354 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 PGBD1Q96JS3 809 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 HAPLN3Q96S86 360 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 SENP6Q9GZR1 1112 aaPredicted RBP3.05□□□□□ -1.92
LINC00428-201ENST00000415620 GREM2Q9H772 168 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 TOPORSQ9NS56 1045 aaPredicted RBP3.05□□□□□ -1.92
LINC00428-201ENST00000415620 INTS13Q9NVM9 706 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 AJAP1Q9UKB5 411 aaPredicted RBP3.05□□□□□ -1.92
LINC00428-201ENST00000415620 ZBTB1Q9Y2K1 713 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 ACTL7AQ9Y615 435 aa3.05□□□□□ -1.92
LINC00428-201ENST00000415620 COL4A1P02462 1669 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 COL4A4P53420 1690 aaPredicted RBP3.04□□□□□ -1.92
LINC00428-201ENST00000415620 ITPR1Q14643 2758 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 KTN1Q86UP2 1357 aaKnown RBP3.04□□□□□ -1.92
LINC00428-201ENST00000415620 LINC00473A8K010 186 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 TCERG1O14776 1098 aaKnown RBP3.04□□□□□ -1.92
LINC00428-201ENST00000415620 NPHP1O15259 732 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 EPHB2P29323 1055 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 PLCD1P51178 756 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 UBXN2AP68543 259 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 ATP8B2P98198 1209 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 MTM1Q13496 603 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 BMS1Q14692 1282 aaKnown RBP3.04□□□□□ -1.92
LINC00428-201ENST00000415620 SEPT2Q15019 361 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 ARHGEF6Q15052 776 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 C21orf62-AS1Q17RA5 79 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 LRRC26Q2I0M4 334 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 AAK1Q2M2I8 961 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 MUM1Q2TAK8 710 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 ANO4Q32M45 955 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 TKFCQ3LXA3 575 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 SLC44A4Q53GD3 710 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 DACT2Q5SW24 774 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 FAM180AQ6UWF9 173 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 RAET1EQ8TD07 263 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 ADAMTS15Q8TE58 950 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 AUTS2Q8WXX7 1259 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 FATE1Q969F0 183 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 ZKSCAN4Q969J2 545 aaPredicted RBP3.04□□□□□ -1.92
LINC00428-201ENST00000415620 CLMNQ96JQ2 1002 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 LBHD1Q9BQE6 289 aaPredicted RBP3.04□□□□□ -1.92
LINC00428-201ENST00000415620 GSTO2Q9H4Y5 243 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 C11orf49Q9H6J7 331 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 LDAHQ9H6V9 325 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 TMEM140Q9NV12 185 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 MTMR4Q9NYA4 1195 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 ELOVL5Q9NYP7 299 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 CTTNBP2NLQ9P2B4 639 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 SERGEFQ9UGK8 458 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 ZNF112Q9UJU3 913 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 PADI4Q9UM07 663 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 GVINP1Q7Z2Y8 2422 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 FAM186AA6NE01 2351 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 UBR2Q8IWV8 1755 aa3.04□□□□□ -1.92
LINC00428-201ENST00000415620 ADGRA2Q96PE1 1338 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 HELZ2Q9BYK8 2649 aaKnown RBP3.03□□□□□ -1.92
LINC00428-201ENST00000415620 MYO9BQ13459 2157 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 IGKV2D-30A0A075B6S6 120 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 CDHR4A6H8M9 788 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 VWC2LB2RUY7 222 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 ERC2O15083 957 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 ENDOD1O94919 500 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 AMY1AP04745 511 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 PHKG2P15735 406 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 KCNA2P16389 499 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 MCAMP43121 646 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 PER3P56645 1201 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 ZNF260Q3ZCT1 412 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 TMEM119Q4V9L6 283 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.03□□□□□ -1.92
LINC00428-201ENST00000415620 TSHZ1Q6ZSZ6 1077 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 TMPRSS9Q7Z410 1059 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 YTHDF3Q7Z739 585 aaKnown RBP3.03□□□□□ -1.92
LINC00428-201ENST00000415620 CLRN3Q8NCR9 226 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 SLC30A5Q8TAD4 765 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 MYCBPAPQ8TBZ2 947 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 ATOH1Q92858 354 aaPredicted RBP3.03□□□□□ -1.92
LINC00428-201ENST00000415620 CYFIP2Q96F07 1278 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 MRFAP1L1Q96HT8 127 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 IFT122Q9HBG6 1241 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 ST3GAL5Q9UNP4 418 aa3.03□□□□□ -1.92
LINC00428-201ENST00000415620 ECM29Q5VYK3 1845 aa3.03□□□□□ -1.93
LINC00428-201ENST00000415620 LRRC37AA6NMS7 1700 aa3.02□□□□□ -1.93
LINC00428-201ENST00000415620 A0A1W2PP64 1363 aa3.02□□□□□ -1.93
LINC00428-201ENST00000415620 SBNO2Q9Y2G9 1366 aa3.02□□□□□ -1.93
LINC00428-201ENST00000415620 PTPRZ1P23471 2315 aaPredicted RBP3.02□□□□□ -1.93
LINC00428-201ENST00000415620 RLFQ13129 1914 aa3.02□□□□□ -1.93
LINC00428-201ENST00000415620 CCDC187A0A096LP49 1063 aa3.02□□□□□ -1.93
LINC00428-201ENST00000415620 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.02□□□□□ -1.93
LINC00428-201ENST00000415620 MYMKA6NI61 221 aa3.02□□□□□ -1.93
LINC00428-201ENST00000415620 E9PSI1 815 aa3.02□□□□□ -1.93
LINC00428-201ENST00000415620 PSMD14O00487 310 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms