RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 GJA4P35212 333 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 VAMP7P51809 220 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 USP46P62068 366 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 SLC7A9P82251 487 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 TAF10Q12962 218 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 ZNF658Q5TYW1 1059 aaPredicted RBP21.7■■□□□ 1.06
PTPRU-203ENST00000415600 SCARA5Q6ZMJ2 495 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 UNC93AQ86WB7 457 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 PLEKHO2Q8TD55 490 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 B3GNT5Q9BYG0 378 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 COMMD8Q9NX08 183 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 WNT6Q9Y6F9 365 aa21.7■■□□□ 1.06
PTPRU-203ENST00000415600 CHURC1-FNTBB4DL54 471 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 FNTBP49356 437 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 LMNB2Q03252 620 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 EML3Q32P44 896 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 FSTL4Q6MZW2 842 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 CEP68Q76N32 757 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 SV2AQ7L0J3 742 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 ZSCAN30Q86W11 494 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 DCLK2Q8N568 766 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 CD101Q93033 1021 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 FBXO32Q969P5 355 aa21.69■■□□□ 1.06
PTPRU-203ENST00000415600 KIF26AQ9ULI4 1882 aaPredicted RBP21.68■■□□□ 1.06
PTPRU-203ENST00000415600 CCDC163A0A0D9SF12 145 aa21.68■■□□□ 1.06
PTPRU-203ENST00000415600 PRR5-ARHGAP8B1AHC4 643 aa21.68■■□□□ 1.06
PTPRU-203ENST00000415600 ESPNB1AK53 854 aa21.68■■□□□ 1.06
PTPRU-203ENST00000415600 PPP1R3GB7ZBB8 358 aa21.68■■□□□ 1.06
PTPRU-203ENST00000415600 PSMC2P35998 433 aaKnown RBP21.68■■□□□ 1.06
PTPRU-203ENST00000415600 CDH8P55286 799 aa21.68■■□□□ 1.06
PTPRU-203ENST00000415600 ARHGAP8P85298 464 aa21.68■■□□□ 1.06
PTPRU-203ENST00000415600 IFRD2Q12894 506 aaPredicted RBP21.68■■□□□ 1.06
PTPRU-203ENST00000415600 PUM1Q14671 1186 aaKnown RBP eCLIP21.68■■□□□ 1.06
PTPRU-203ENST00000415600 HEATR6Q6AI08 1181 aaKnown RBP21.68■■□□□ 1.06
PTPRU-203ENST00000415600 FAM35AQ86V20 835 aa21.68■■□□□ 1.06
PTPRU-203ENST00000415600 FAM186BQ8IYM0 893 aa21.68■■□□□ 1.06
PTPRU-203ENST00000415600 ACDQ96AP0 544 aa21.68■■□□□ 1.06
PTPRU-203ENST00000415600 GTPBP4Q9BZE4 634 aaKnown RBP21.68■■□□□ 1.06
PTPRU-203ENST00000415600 NME7Q9Y5B8 376 aa21.68■■□□□ 1.06
PTPRU-203ENST00000415600 OTOL1A6NHN0 477 aaPredicted RBP21.67■■□□□ 1.06
PTPRU-203ENST00000415600 K7ESF4 209 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 LEFTY2O00292 366 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 CLDN5O00501 218 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 LRP3O75074 770 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 VNN1O95497 513 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 ASS1P00966 412 aaKnown RBP21.67■■□□□ 1.06
PTPRU-203ENST00000415600 TPM3P06753 285 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 RETP07949 1114 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 CD44P16070 742 aaKnown RBP21.67■■□□□ 1.06
PTPRU-203ENST00000415600 RAP1GAPP47736 663 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 GALK1P51570 392 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 DLG4P78352 724 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 ADAM9Q13443 819 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 RIN3Q8TB24 985 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 USP18Q9UMW8 372 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 PTPRDP23468 1912 aa21.67■■□□□ 1.06
PTPRU-203ENST00000415600 STX10O60499 249 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 FOXD2O60548 495 aaPredicted RBP21.66■■□□□ 1.06
PTPRU-203ENST00000415600 RNF40O75150 1001 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 AP1G2O75843 785 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 MBL2P11226 248 aaPredicted RBP21.66■■□□□ 1.06
PTPRU-203ENST00000415600 HECTD3Q5T447 861 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 ACOT1Q86TX2 421 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 WDR5BQ86VZ2 330 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 CAMKK1Q8N5S9 505 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 MED15Q96RN5 788 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 NACA2Q9H009 215 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 FBXO44Q9H4M3 255 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 CYP3A43Q9HB55 503 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 KRT82Q9NSB4 513 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 TBC1D14Q9P2M4 693 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 CPQQ9Y646 472 aa21.66■■□□□ 1.06
PTPRU-203ENST00000415600 OAS1P00973 400 aaKnown RBP21.65■■□□□ 1.06
PTPRU-203ENST00000415600 EGFP01133 1207 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 HLA-DRAP01903 254 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 GTF2H1P32780 548 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 TUBP50607 506 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 EDRF1Q3B7T1 1238 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 WDR44Q5JSH3 913 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 CRYBG2Q8N1P7 616 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 TTC39CQ8N584 583 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 SPC24Q8NBT2 197 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 FANCLQ9NW38 375 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 MAPK8IP1Q9UQF2 711 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 ZKSCAN5Q9Y2L8 839 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 NFE2L3Q9Y4A8 694 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 GREB1Q4ZG55 1949 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 AKAP3O75969 853 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 OLFM2O95897 454 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 ADH1CP00326 375 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 NDST1P52848 882 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 FANCCQ00597 558 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 SMYD4Q8IYR2 804 aaPredicted RBP21.65■■□□□ 1.06
PTPRU-203ENST00000415600 SMPD4Q9NXE4 827 aa21.65■■□□□ 1.06
PTPRU-203ENST00000415600 CEP250Q9BV73 2442 aa21.64■■□□□ 1.06
PTPRU-203ENST00000415600 ANAPC1Q9H1A4 1944 aa21.64■■□□□ 1.05
PTPRU-203ENST00000415600 FAM200BP0CF97 657 aa21.64■■□□□ 1.05
PTPRU-203ENST00000415600 EPB41P11171 864 aaKnown RBP21.64■■□□□ 1.05
PTPRU-203ENST00000415600 ZNF18P17022 549 aa21.64■■□□□ 1.05
PTPRU-203ENST00000415600 SLC5A3P53794 718 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms