RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 GSTA2P09210 222 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 DLDP09622 509 aaKnown RBP10.21□□□□□ -0.77
CD44-206ENST00000415148 PTK7Q13308 1070 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 RCN2Q14257 317 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 MXD4Q14582 209 aaPredicted RBP10.21□□□□□ -0.77
CD44-206ENST00000415148 MDH1BQ5I0G3 518 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 LGSNQ5TDP6 509 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 TTC39BQ5VTQ0 682 aaPredicted RBP10.21□□□□□ -0.77
CD44-206ENST00000415148 XYLT1Q86Y38 959 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 KIAA0319LQ8IZA0 1049 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 PRPF31Q8WWY3 499 aaKnown RBP10.21□□□□□ -0.77
CD44-206ENST00000415148 ANKRD36BP1Q96IX9 119 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 SERAC1Q96JX3 654 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 DDX50Q9BQ39 737 aaKnown RBP10.21□□□□□ -0.77
CD44-206ENST00000415148 BCO2Q9BYV7 579 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 C2orf40Q9H1Z8 148 aa10.21□□□□□ -0.77
CD44-206ENST00000415148 TNS1Q9HBL0 1735 aaKnown RBP10.21□□□□□ -0.78
CD44-206ENST00000415148 CAPN9O14815 690 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 GYG2O15488 501 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 FESP07332 822 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 RBP3P10745 1247 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 PTPRAP18433 802 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 RPS12P25398 132 aaKnown RBP10.21□□□□□ -0.78
CD44-206ENST00000415148 VHLP40337 213 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 ELK3P41970 407 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 STAT5BP51692 787 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 TFDP2Q14188 446 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 KCNJ11Q14654 390 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 LBRQ14739 615 aaKnown RBP10.21□□□□□ -0.78
CD44-206ENST00000415148 NOMO1Q15155 1222 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 ZRSR2Q15696 482 aaKnown RBP10.21□□□□□ -0.78
CD44-206ENST00000415148 ALYREFQ86V81 257 aaKnown RBP10.21□□□□□ -0.78
CD44-206ENST00000415148 ZBTB8OSQ8IWT0 167 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 ARHGAP24Q8N264 748 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 FAM71DQ8N9W8 422 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 CHST13Q8NET6 341 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 MCRS1Q96EZ8 462 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 IFT43Q96FT9 208 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 CLPTM1LQ96KA5 538 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 FAM167AQ96KS9 214 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 TMEM120AQ9BXJ8 343 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 PICK1Q9NRD5 415 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 KRT82Q9NSB4 513 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 TAS2R1Q9NYW7 299 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 USP18Q9UMW8 372 aa10.21□□□□□ -0.78
CD44-206ENST00000415148 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.21□□□□□ -0.78
CD44-206ENST00000415148 TCRBV9S1A1TA0A576 114 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 A8MXQ7 604 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 KIF3CO14782 793 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 HOXC6P09630 235 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 HARSP12081 509 aaKnown RBP10.2□□□□□ -0.78
CD44-206ENST00000415148 BGNP21810 368 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 PROZP22891 400 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 RAB27AP51159 221 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 BASP1P80723 227 aaKnown RBP10.2□□□□□ -0.78
CD44-206ENST00000415148 ROR1Q01973 937 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 KLC1Q07866 573 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 SMTNL2Q2TAL5 461 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 KCNT1Q5JUK3 1230 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 CCDC62Q6P9F0 684 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 C4orf22Q6V702 233 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 TSHZ1Q6ZSZ6 1077 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 ZBTB33Q86T24 672 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 SLC26A11Q86WA9 606 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 CCNJLQ8IV13 435 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 TMEM130Q8N3G9 435 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 RAB3IL1Q8TBN0 382 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 SPATA18Q8TC71 538 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 ZNF526Q8TF50 670 aaPredicted RBP10.2□□□□□ -0.78
CD44-206ENST00000415148 PCYT2Q99447 389 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 TSC22D3Q99576 134 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 MKS1Q9NXB0 559 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 PAK5Q9P286 719 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 TJP2Q9UDY2 1190 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 CYTH4Q9UIA0 394 aa10.2□□□□□ -0.78
CD44-206ENST00000415148 FAM237BA0A1B0GVD1 139 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 KRT37O76014 449 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 IL18RAPO95256 599 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 PSMG1O95456 288 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 NPTXRO95502 500 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 PRKCBP05771 671 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 CD48P09326 243 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 TGFB3P10600 412 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 ESRRAP11474 423 aaPredicted RBP10.19□□□□□ -0.78
CD44-206ENST00000415148 KCNA3P22001 575 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 MIPP30301 263 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 SARNPP82979 210 aaKnown RBP10.19□□□□□ -0.78
CD44-206ENST00000415148 TFAMQ00059 246 aaKnown RBP10.19□□□□□ -0.78
CD44-206ENST00000415148 ZBTB16Q05516 673 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 FAAP100Q0VG06 881 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 DARS2Q6PI48 645 aaKnown RBP10.19□□□□□ -0.78
CD44-206ENST00000415148 MPZL3Q6UWV2 235 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 CDHR3Q6ZTQ4 885 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 ILDR2Q71H61 639 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 TREML1Q86YW5 311 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 LRRC39Q96DD0 335 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 RTP4Q96DX8 246 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 OXNAD1Q96HP4 312 aaPredicted RBP10.19□□□□□ -0.78
CD44-206ENST00000415148 MECRQ9BV79 373 aa10.19□□□□□ -0.78
CD44-206ENST00000415148 MIS12Q9H081 205 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms