RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 THNSL1Q8IYQ7 743 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 UCMAQ8WVF2 138 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 ZNF778Q96MU6 729 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 TRIM6Q9C030 488 aaPredicted RBP10.3□□□□□ -0.76
SS18-203ENST00000415083 NMUR2Q9GZQ4 415 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 GPATCH2LQ9NWQ4 482 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 A0A0G2JND7 137 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 EME2A4GXA9 379 aaPredicted RBP10.3□□□□□ -0.76
SS18-203ENST00000415083 DPPA5A6NC42 116 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 PRKCBP05771 671 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 RBP3P10745 1247 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 GRIA1P42261 906 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 GRIK3Q13003 919 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 KPNB1Q14974 876 aaKnown RBP10.3□□□□□ -0.76
SS18-203ENST00000415083 STXBP2Q15833 593 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 TRIM68Q6AZZ1 485 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 TSHZ1Q6ZSZ6 1077 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 CHSY1Q86X52 802 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 RNF149Q8NC42 400 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 UBA3Q8TBC4 463 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 LPIN3Q9BQK8 851 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 SLC17A6Q9P2U8 582 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 USP18Q9UMW8 372 aa10.3□□□□□ -0.76
SS18-203ENST00000415083 CFAP69A5D8W1 941 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 TM9SF1O15321 606 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 B4GALT4O60513 344 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 CILPO75339 1184 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 STAM2O75886 525 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 CSH1P0DML2 217 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 CSH2P0DML3 217 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 AMPD1P23109 780 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 GMPRP36959 345 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 STAT5BP51692 787 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 SLC10A2Q12908 348 aaPredicted RBP10.29□□□□□ -0.76
SS18-203ENST00000415083 PTK7Q13308 1070 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 AMHR2Q16671 573 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 TRMT10BQ6PF06 316 aaKnown RBP10.29□□□□□ -0.76
SS18-203ENST00000415083 UNC5BQ8IZJ1 945 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 SPATA18Q8TC71 538 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 KLRG1Q96E93 195 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 ZNF333Q96JL9 665 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 RAB3IPQ96QF0 476 aaPredicted RBP10.29□□□□□ -0.76
SS18-203ENST00000415083 CDT1Q9H211 546 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 FZD8Q9H461 694 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 SAR1AQ9NR31 198 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 PLA2G4CQ9UP65 541 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 CTDP1Q9Y5B0 961 aaPredicted RBP10.29□□□□□ -0.76
SS18-203ENST00000415083 TBX10O75333 385 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 GRAP2O75791 330 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 ATP5HO75947 161 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 PRKCGP05129 697 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 ADORA2AP29274 412 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 ARRB2P32121 409 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 RFC5P40937 340 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 BASP1P80723 227 aaKnown RBP10.29□□□□□ -0.76
SS18-203ENST00000415083 TAP1Q03518 808 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 MBTD1Q05BQ5 628 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 SETDB1Q15047 1291 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 TAF11Q15544 211 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 WASHC2DQ5SRD0 308 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 FOXB2Q5VYV0 432 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 RFX6Q8HWS3 928 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.29□□□□□ -0.76
SS18-203ENST00000415083 ZNF398Q8TD17 642 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 TRPM4Q8TD43 1214 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 COPS5Q92905 334 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 APOPT1Q96IL0 206 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 CDHR1Q96JP9 859 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 VPS33BQ9H267 617 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 NMRK1Q9NWW6 199 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 GJD2Q9UKL4 321 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 AGTPBP1Q9UPW5 1226 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 MFHAS1Q9Y4C4 1052 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 C2CD4BA6NLJ0 364 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 GCKP35557 465 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 MAGEA3P43357 314 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 YWHAEP62258 255 aaKnown RBP10.29□□□□□ -0.76
SS18-203ENST00000415083 CDK16Q00536 496 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 CCDC33Q8N5R6 958 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 OXNAD1Q96HP4 312 aaPredicted RBP10.29□□□□□ -0.76
SS18-203ENST00000415083 GPR20Q99678 358 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 BTBD10Q9BSF8 475 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 TSSK1BQ9BXA7 367 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 MRPL4Q9BYD3 311 aaKnown RBP10.29□□□□□ -0.76
SS18-203ENST00000415083 IFT122Q9HBG6 1241 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 PNPLA8Q9NP80 782 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 WASF2Q9Y6W5 498 aa10.29□□□□□ -0.76
SS18-203ENST00000415083 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.28□□□□□ -0.76
SS18-203ENST00000415083 ENO4A6NNW6 628 aa10.28□□□□□ -0.76
SS18-203ENST00000415083 LACTBL1A8MY62 500 aa10.28□□□□□ -0.76
SS18-203ENST00000415083 LPXNO60711 386 aa10.28□□□□□ -0.76
SS18-203ENST00000415083 CNMDO75829 334 aa10.28□□□□□ -0.76
SS18-203ENST00000415083 RARBP10826 455 aa10.28□□□□□ -0.76
SS18-203ENST00000415083 CD1EP15812 388 aa10.28□□□□□ -0.76
SS18-203ENST00000415083 ATP6V1C1P21283 382 aa10.28□□□□□ -0.76
SS18-203ENST00000415083 ATXN1P54253 815 aaKnown RBP10.28□□□□□ -0.76
SS18-203ENST00000415083 BMPR2Q13873 1038 aa10.28□□□□□ -0.76
SS18-203ENST00000415083 GNPTABQ3T906 1256 aa10.28□□□□□ -0.76
SS18-203ENST00000415083 CCDC14Q49A88 953 aa10.28□□□□□ -0.76
SS18-203ENST00000415083 JADE1Q6IE81 842 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms