RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MYRFLQ96LU7 910 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 ZNF558Q96NG5 402 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 SAMD11Q96NU1 681 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 TTC1Q99614 292 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 MCMBPQ9BTE3 642 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 C11orf84Q9BUA3 381 aaPredicted RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 NFKBIZQ9BYH8 718 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 FGFBP2Q9BYJ0 223 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 BLZF1Q9H2G9 400 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 NRDE2Q9H7Z3 1164 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 ARHGAP28Q9P2N2 729 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 ANKFY1Q9P2R3 1169 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 CFAP45Q9UL16 551 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 RNF112Q9ULX5 631 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 PLAGL2Q9UPG8 496 aa5.32□□□□□ -1.56
VPS41-205ENST00000414632 PRG3Q9Y2Y8 225 aaPredicted RBP5.32□□□□□ -1.56
VPS41-205ENST00000414632 BRWD1Q9NSI6 2320 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 C2orf16Q68DN1 1984 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 VCANP13611 3396 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 SHISA3A0PJX4 238 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 C2orf71A6NGG8 1288 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 CASTOR2A6NHX0 329 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 C5orf67F2Z3F1 127 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 ARNTLO00327 626 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 NEMP1O14524 444 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 PER2O15055 1255 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 LINC01565O15544 149 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 SLC26A4O43511 780 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 ZNF623O75123 536 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 RB1P06400 928 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 THBDP07204 575 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 CD3EP07766 207 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 FAM87AP0C7U9 286 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 LAG3P18627 525 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 CTSKP43235 329 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 AFMP43652 599 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 OR1G1P47890 313 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 SLC11A1P49279 550 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 EFNA5P52803 228 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 NCKAP1LP55160 1127 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 ERVFC1P60507 584 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 RBM10P98175 930 aaKnown RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 SPAG1Q07617 926 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 MCL1Q07820 350 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 CAMK1Q14012 370 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 CLUL1Q15846 466 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 FAM187BQ17R55 369 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 CLEC16AQ2KHT3 1053 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 SKOR2Q2VWA4 1001 aaPredicted RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 UVSSAQ2YD98 709 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 TCEAL5Q5H9L2 206 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 RESP18Q5W5W9 173 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 ABHD17CQ6PCB6 329 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 CCDC73Q6ZRK6 1079 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 HAUS6Q7Z4H7 955 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 DDX53Q86TM3 631 aaKnown RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 PPIL6Q8IXY8 311 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 ARMC10Q8N2F6 343 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 SLC17A8Q8NDX2 589 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 OR2W6PQ8NHA6 318 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 SPPL3Q8TCT6 385 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 HASPINQ8TF76 798 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 NOC3LQ8WTT2 800 aaKnown RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 DNAJC19Q96DA6 116 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 MRPL38Q96DV4 380 aaKnown RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 CCDC51Q96ER9 411 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 B3GALT6Q96L58 329 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 FAM193BQ96PV7 902 aaPredicted RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 RPS6KC1Q96S38 1066 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 ACO2Q99798 780 aaKnown RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 PAAF1Q9BRP4 392 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 ADPGKQ9BRR6 497 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 TCHPQ9BT92 498 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 TIPINQ9BVW5 301 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 MRPL9Q9BYD2 267 aaKnown RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 HAPLN2Q9GZV7 340 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 CDT1Q9H211 546 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 KCNF1Q9H3M0 494 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 GOLPH3LQ9H4A5 285 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 IFT22Q9H7X7 185 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 PARVGQ9HBI0 331 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 ENTPD7Q9NQZ7 604 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 GEMIN8Q9NWZ8 242 aaKnown RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 SAMD15Q9P1V8 674 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 LARSQ9P2J5 1176 aaKnown RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 STK17AQ9UEE5 414 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 RCOR1Q9UKL0 485 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 ODF2LQ9ULJ1 636 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 RWDD3Q9Y3V2 267 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 ST14Q9Y5Y6 855 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 TSC2P49815 1807 aa5.31□□□□□ -1.56
VPS41-205ENST00000414632 MTCL1Q9Y4B5 1905 aaKnown RBP5.31□□□□□ -1.56
VPS41-205ENST00000414632 HIDE1A8MVS5 230 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 PRR33A8MZF0 331 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 ANKRD63C9JTQ0 380 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 H3BQ06 376 aaPredicted RBP5.3□□□□□ -1.56
VPS41-205ENST00000414632 ABLIM1O14639 778 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 PTGESO14684 152 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 NRP1O14786 923 aa5.3□□□□□ -1.56
VPS41-205ENST00000414632 AURKAO14965 403 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms