RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 LRRC32Q14392 662 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 FSTL4Q6MZW2 842 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 OVCA2Q8WZ82 227 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 C2orf42Q9NWW7 574 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 COMMD8Q9NX08 183 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 KIAA1468Q9P260 1216 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 CFAP97Q9P2B7 532 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 PIEZO1Q92508 2521 aa27.83■■■□□ 2.05
VEGFA-207ENST00000413642 BICDL2A1A5D9 508 aa27.82■■■□□ 2.04
VEGFA-207ENST00000413642 ZDHHC11BP0C7U3 371 aa27.82■■■□□ 2.04
VEGFA-207ENST00000413642 HOXC13P31276 330 aa27.82■■■□□ 2.04
VEGFA-207ENST00000413642 SATB1Q01826 763 aa27.82■■■□□ 2.04
VEGFA-207ENST00000413642 PAK1Q13153 545 aa27.82■■■□□ 2.04
VEGFA-207ENST00000413642 CCINQ13939 588 aa27.82■■■□□ 2.04
VEGFA-207ENST00000413642 HECTD3Q5T447 861 aa27.82■■■□□ 2.04
VEGFA-207ENST00000413642 CPA6Q8N4T0 437 aa27.82■■■□□ 2.04
VEGFA-207ENST00000413642 TMEM176AQ96HP8 235 aa27.82■■■□□ 2.04
VEGFA-207ENST00000413642 FAXDC2Q96IV6 333 aa27.82■■■□□ 2.04
VEGFA-207ENST00000413642 KIF26AQ9ULI4 1882 aaPredicted RBP27.82■■■□□ 2.04
VEGFA-207ENST00000413642 TRIM21P19474 475 aaKnown RBP27.81■■■□□ 2.04
VEGFA-207ENST00000413642 GALK1P51570 392 aa27.81■■■□□ 2.04
VEGFA-207ENST00000413642 CUL2Q13617 745 aa27.81■■■□□ 2.04
VEGFA-207ENST00000413642 ZNF528Q3MIS6 628 aa27.81■■■□□ 2.04
VEGFA-207ENST00000413642 TMEM196Q5HYL7 178 aa27.81■■■□□ 2.04
VEGFA-207ENST00000413642 DGKKQ5KSL6 1271 aa27.81■■■□□ 2.04
VEGFA-207ENST00000413642 SNX30Q5VWJ9 437 aa27.81■■■□□ 2.04
VEGFA-207ENST00000413642 SRRTQ9BXP5 876 aaKnown RBP27.81■■■□□ 2.04
VEGFA-207ENST00000413642 ANAPC1Q9H1A4 1944 aa27.8■■■□□ 2.04
VEGFA-207ENST00000413642 CACNA1IQ9P0X4 2223 aa27.8■■■□□ 2.04
VEGFA-207ENST00000413642 TRDMT1O14717 391 aaKnown RBP27.8■■■□□ 2.04
VEGFA-207ENST00000413642 CYP26A1O43174 497 aa27.8■■■□□ 2.04
VEGFA-207ENST00000413642 TDGF1P13385 188 aa27.8■■■□□ 2.04
VEGFA-207ENST00000413642 ACO1P21399 889 aaKnown RBP27.8■■■□□ 2.04
VEGFA-207ENST00000413642 PKN3Q6P5Z2 889 aa27.8■■■□□ 2.04
VEGFA-207ENST00000413642 FOXR2Q6PJQ5 311 aa27.8■■■□□ 2.04
VEGFA-207ENST00000413642 ATP2A3Q93084 1043 aa27.8■■■□□ 2.04
VEGFA-207ENST00000413642 WBP2Q969T9 261 aa27.8■■■□□ 2.04
VEGFA-207ENST00000413642 ZFRQ96KR1 1074 aaKnown RBP27.8■■■□□ 2.04
VEGFA-207ENST00000413642 DUSP16Q9BY84 665 aa27.8■■■□□ 2.04
VEGFA-207ENST00000413642 OSER1Q9NX31 292 aa27.8■■■□□ 2.04
VEGFA-207ENST00000413642 EGFP01133 1207 aa27.79■■■□□ 2.04
VEGFA-207ENST00000413642 MAMSTRQ6ZN01 415 aa27.79■■■□□ 2.04
VEGFA-207ENST00000413642 SPEM1Q8N4L4 309 aa27.79■■■□□ 2.04
VEGFA-207ENST00000413642 TRIML1Q8N9V2 468 aa27.79■■■□□ 2.04
VEGFA-207ENST00000413642 MED15Q96RN5 788 aa27.79■■■□□ 2.04
VEGFA-207ENST00000413642 FBXO44Q9H4M3 255 aa27.79■■■□□ 2.04
VEGFA-207ENST00000413642 NMUR1Q9HB89 426 aa27.79■■■□□ 2.04
VEGFA-207ENST00000413642 TBX18O95935 607 aa27.78■■■□□ 2.04
VEGFA-207ENST00000413642 CXCL12P48061 93 aa27.78■■■□□ 2.04
VEGFA-207ENST00000413642 TTC39CQ8N584 583 aa27.78■■■□□ 2.04
VEGFA-207ENST00000413642 UBR7Q8N806 425 aa27.78■■■□□ 2.04
VEGFA-207ENST00000413642 LMO3Q8TAP4 145 aa27.78■■■□□ 2.04
VEGFA-207ENST00000413642 NELL1Q92832 810 aa27.78■■■□□ 2.04
VEGFA-207ENST00000413642 KAT5Q92993 513 aa27.78■■■□□ 2.04
VEGFA-207ENST00000413642 P2RY13Q9BPV8 354 aa27.78■■■□□ 2.04
VEGFA-207ENST00000413642 IER2Q9BTL4 223 aa27.78■■■□□ 2.04
VEGFA-207ENST00000413642 PATJQ8NI35 1801 aa27.78■■■□□ 2.04
VEGFA-207ENST00000413642 ZFHX2Q9C0A1 2572 aaPredicted RBP27.77■■■□□ 2.04
VEGFA-207ENST00000413642 CCR3P51677 355 aa27.77■■■□□ 2.04
VEGFA-207ENST00000413642 GRSF1Q12849 480 aaKnown RBP eCLIP27.77■■■□□ 2.04
VEGFA-207ENST00000413642 GAB4Q2WGN9 574 aa27.77■■■□□ 2.04
VEGFA-207ENST00000413642 ARHGAP17Q68EM7 881 aa27.77■■■□□ 2.04
VEGFA-207ENST00000413642 TRIM59Q8IWR1 403 aa27.77■■■□□ 2.04
VEGFA-207ENST00000413642 EZH1Q92800 747 aaPredicted RBP27.77■■■□□ 2.04
VEGFA-207ENST00000413642 DNAI2Q9GZS0 605 aa27.77■■■□□ 2.04
VEGFA-207ENST00000413642 ZSCAN32Q9NX65 697 aa27.77■■■□□ 2.04
VEGFA-207ENST00000413642 NUDT5Q9UKK9 219 aa27.77■■■□□ 2.04
VEGFA-207ENST00000413642 SCML2Q9UQR0 700 aa27.77■■■□□ 2.04
VEGFA-207ENST00000413642 A0A1W2PQH9 124 aa27.76■■■□□ 2.03
VEGFA-207ENST00000413642 TUBP50607 506 aa27.76■■■□□ 2.03
VEGFA-207ENST00000413642 KIF11P52732 1056 aa27.76■■■□□ 2.03
VEGFA-207ENST00000413642 DMWDQ09019 674 aa27.76■■■□□ 2.03
VEGFA-207ENST00000413642 ZC3H14Q6PJT7 736 aaKnown RBP27.76■■■□□ 2.03
VEGFA-207ENST00000413642 ADGRG2Q8IZP9 1017 aa27.76■■■□□ 2.03
VEGFA-207ENST00000413642 ZBTB44Q8NCP5 570 aa27.76■■■□□ 2.03
VEGFA-207ENST00000413642 CLSTN2Q9H4D0 955 aa27.76■■■□□ 2.03
VEGFA-207ENST00000413642 TLR8Q9NR97 1041 aaKnown RBP27.76■■■□□ 2.03
VEGFA-207ENST00000413642 POLR3BQ9NW08 1133 aaPredicted RBP27.76■■■□□ 2.03
VEGFA-207ENST00000413642 ZNF638Q14966 1978 aaKnown RBP27.75■■■□□ 2.03
VEGFA-207ENST00000413642 PMM2O15305 246 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 TLR5O60602 858 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 NFATC1O95644 943 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 LMNAP02545 664 aaKnown RBP27.75■■■□□ 2.03
VEGFA-207ENST00000413642 CYP17A1P05093 508 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 IRF1P10914 325 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 AMPD2Q01433 879 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 KCNH2Q12809 1159 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 GOLGA7BQ2TAP0 167 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 SCD5Q86SK9 330 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 TTC30AQ86WT1 665 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 ATRIPQ8WXE1 791 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 CD101Q93033 1021 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 NT5C1BQ96P26 610 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 NACA2Q9H009 215 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 PNPLA8Q9NP80 782 aa27.75■■■□□ 2.03
VEGFA-207ENST00000413642 ANTXRLA6NF34 631 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 TULP2O00295 520 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 MDM4O15151 490 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 CALCAP01258 141 aa27.74■■■□□ 2.03
VEGFA-207ENST00000413642 CD19P15391 556 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms