RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 SH3BGRP55822 239 aaPredicted RBP9.29□□□□□ -0.92
SIK3-202ENST00000413553 USP46P62068 366 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 SNRPFP62306 86 aaKnown RBP9.29□□□□□ -0.92
SIK3-202ENST00000413553 ARHGAP8P85298 464 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 ZNF200P98182 395 aaPredicted RBP9.29□□□□□ -0.92
SIK3-202ENST00000413553 OTUD4Q01804 1114 aaKnown RBP9.29□□□□□ -0.92
SIK3-202ENST00000413553 BST1Q10588 318 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 DMP1Q13316 513 aaPredicted RBP9.29□□□□□ -0.92
SIK3-202ENST00000413553 VGLL4Q14135 290 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 UBAP2LQ14157 1087 aaKnown RBP9.29□□□□□ -0.92
SIK3-202ENST00000413553 DHDDSQ86SQ9 333 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 TRIM74Q86UV6 250 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 TRIM73Q86UV7 250 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 SHKBP1Q8TBC3 707 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 ACTL9Q8TC94 416 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 TMC2Q8TDI7 906 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 CCDC124Q96CT7 223 aaKnown RBP9.29□□□□□ -0.92
SIK3-202ENST00000413553 SRPK1Q96SB4 655 aaKnown RBP9.29□□□□□ -0.92
SIK3-202ENST00000413553 KMT5AQ9NQR1 393 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 PLA2G4CQ9UP65 541 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 KBTBD13C9JR72 458 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 HNRNPRO43390 633 aaKnown RBP9.29□□□□□ -0.92
SIK3-202ENST00000413553 OR6B1O95007 311 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 ICAM1P05362 532 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 ELK3P41970 407 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 AQP4P55087 323 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 CHI3L2Q15782 390 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 SMTNL2Q2TAL5 461 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 MMEL1Q495T6 779 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 SFT2D3Q587I9 215 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 ISLR2Q6UXK2 745 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 ABRAQ8N0Z2 381 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 GPD1LQ8N335 351 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 NKD2Q969F2 451 aaPredicted RBP9.29□□□□□ -0.92
SIK3-202ENST00000413553 E2F7Q96AV8 911 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 RIT2Q99578 217 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 SLC13A1Q9BZW2 595 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 KCNH7Q9NS40 1196 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 POLIQ9UNA4 740 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 SNCAIPQ9Y6H5 919 aa9.29□□□□□ -0.92
SIK3-202ENST00000413553 TCRBV9S1A1TA0A576 114 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 TRIM49D1C9J1S8 452 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 PDLIM1O00151 329 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 BUD23O43709 281 aaKnown RBP9.28□□□□□ -0.92
SIK3-202ENST00000413553 PFDN1O60925 122 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 FAM155BO75949 473 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 HLA-DRAP01903 254 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 YY1P25490 414 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 SERPINB6P35237 376 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 RPL22P35268 128 aaKnown RBP9.28□□□□□ -0.92
SIK3-202ENST00000413553 GRIA2P42262 883 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 NPTX2P47972 431 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 SLC25A3Q00325 362 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 PABPC1LQ4VXU2 614 aaKnown RBP9.28□□□□□ -0.92
SIK3-202ENST00000413553 EFHC1Q5JVL4 640 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 ATG16L1Q676U5 607 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 OLFML2BQ68BL8 750 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 DNAJC24Q6P3W2 148 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 B3GNT9Q6UX72 402 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 TRIM72Q6ZMU5 477 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 CDHR3Q6ZTQ4 885 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 PDSS2Q86YH6 399 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 CRLF3Q8IUI8 442 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 MAP4K3Q8IVH8 894 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 NAT8LQ8N9F0 302 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 STKLD1Q8NE28 680 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 TMEM174Q8WUU8 243 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 OTUD5Q96G74 571 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 MFSD14AQ96MC6 490 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 MXRA8Q9BRK3 442 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 GPAMQ9HCL2 828 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 RHBDL2Q9NX52 303 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 DNAJB4Q9UDY4 337 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 TMCO1Q9UM00 188 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 STK10O94804 968 aaKnown RBP9.28□□□□□ -0.92
SIK3-202ENST00000413553 PABPC4LP0CB38 370 aaKnown RBP9.28□□□□□ -0.92
SIK3-202ENST00000413553 UQCRBP14927 111 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 ITGB5P18084 799 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 PEX2P28328 305 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 GTF2H1P32780 548 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 SOX10P56693 466 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 MYBPC3Q14896 1274 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 GRAMD1BQ3KR37 738 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 TMCO4Q5TGY1 634 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 FAM91A1Q658Y4 838 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 PPM1NQ8N819 430 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 TMEM161BQ8NDZ6 487 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 FAM172AQ8WUF8 416 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 ATG4CQ96DT6 458 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 CFAP36Q96G28 342 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 DNAJC1Q96KC8 554 aaKnown RBP9.28□□□□□ -0.92
SIK3-202ENST00000413553 KLHL4Q9C0H6 718 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 ST6GALNAC4Q9H4F1 302 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 ELP3Q9H9T3 547 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 CYP4F11Q9HBI6 524 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 S100A14Q9HCY8 104 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 SOX13Q9UN79 622 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 CYB561D2O14569 222 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 ZNF862O60290 1169 aa9.28□□□□□ -0.92
SIK3-202ENST00000413553 CST8O60676 142 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms