RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 XBP1P17861 261 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 MTHFSP49914 203 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 SP2Q02086 613 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 SLC12A1Q13621 1099 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 CYP2A13Q16696 494 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 RETSATQ6NUM9 610 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 RSRC2Q7L4I2 434 aaKnown RBP5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 RAB11FIP2Q7L804 512 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 TMTC1Q8IUR5 882 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 HERC6Q8IVU3 1022 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 ABRAQ8N0Z2 381 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 SIMC1Q8NDZ2 872 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 SLC30A5Q8TAD4 765 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 Q8TCH9 128 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 OSCP1Q8WVF1 389 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 THAP4Q8WY91 577 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 FAM136AQ96C01 138 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 SENP7Q9BQF6 1050 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 C17orf80Q9BSJ5 609 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 ACTRT3Q9BYD9 372 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 ALOXE3Q9BYJ1 711 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 TPSD1Q9BZJ3 242 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 AMBRA1Q9C0C7 1298 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 ZCWPW1Q9H0M4 648 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 ZNF768Q9H5H4 540 aaKnown RBP5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 CHODLQ9H9P2 273 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 FSCN3Q9NQT6 498 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 SMC4Q9NTJ3 1288 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 VPS51Q9UID3 782 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 DAPP1Q9UN19 280 aa5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.47□□□□□ -1.53
HMGB3P31-201ENST00000413333 TRGV11A0A075B6L2 103 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 ADM5C9JUS6 153 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 TRIM24O15164 1050 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 PPM1DO15297 605 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 PRICKLE3O43900 615 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAM20BO75063 409 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 NCR1O76036 304 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 CFIP05156 583 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 PRKCBP05771 671 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 C8AP07357 584 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 PDHA1P08559 390 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 GATA3P23771 443 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 RBL1P28749 1068 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 EPHA3P29320 983 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 ACTR2P61160 394 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 RESTQ13127 1097 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 FHL3Q13643 280 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 CSHL1Q14406 222 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 DLGAP5Q15398 846 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 LY6KQ17RY6 165 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 HS1BP3Q53T59 392 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 SLC9A4Q6AI14 798 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 NFRKBQ6P4R8 1299 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 HEATR4Q86WZ0 1026 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 CPOQ8IVL8 374 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 COLGALT2Q8IYK4 626 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 SYNE4Q8N205 404 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 MBD3L2Q8NHZ7 208 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 ATG4AQ8WYN0 398 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 NACC2Q96BF6 587 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 ZDHHC12Q96GR4 267 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 KCNC2Q96PR1 638 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 HAPLN3Q96S86 360 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 ADOQ96SZ5 270 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 INO80BQ9C086 356 aaPredicted RBP5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 VPS16Q9H269 839 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 ZCCHC4Q9H5U6 513 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 UNKLQ9H9P5 680 aaKnown RBP5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 SLC27A6Q9Y2P4 619 aa5.46□□□□□ -1.54
HMGB3P31-201ENST00000413333 A6NLC8 198 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 PATE3B3GLJ2 98 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 E7EVH7 732 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 RNASET2O00584 256 aaKnown RBP5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 MBD4O95243 580 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 VNN1O95497 513 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 CER1O95813 267 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 TUBP50607 506 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAM189BP81408 668 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 EIF2B5Q13144 721 aaKnown RBP5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 C1QL4Q86Z23 238 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 IZUMO1Q8IYV9 350 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 CEP70Q8NHQ1 597 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 SUN3Q8TAQ9 357 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 HMGB4Q8WW32 186 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 HERVK_113Q902F9 699 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 RSC1A1Q92681 617 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 OSBPL9Q96SU4 736 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 GPR20Q99678 358 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 SSBP3Q9BWW4 388 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 AKIP1Q9NQ31 210 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 WASH6PQ9NQA3 447 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 INTS13Q9NVM9 706 aa5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 C19orf53Q9UNZ5 99 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAM90A18PA6NE21 464 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAM90A16PA6NEW6 464 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAM90A9PA6NNJ1 464 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 EFCAB8A8MWE9 144 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 GRXCR1A8MXD5 290 aa5.44□□□□□ -1.54
HMGB3P31-201ENST00000413333 FAM90A5PA8MXJ8 464 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms