RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TRDMT1O14717 391 aaKnown RBP18.37■□□□□ 0.53
SDCBP-202ENST00000413219 RTN3O95197 1032 aaPredicted RBP18.37■□□□□ 0.53
SDCBP-202ENST00000413219 CST3P01034 146 aaPredicted RBP18.37■□□□□ 0.53
SDCBP-202ENST00000413219 ENO1P06733 434 aaKnown RBP18.37■□□□□ 0.53
SDCBP-202ENST00000413219 CRABP2P29373 138 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 ROR1Q01973 937 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 DSG1Q02413 1049 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 BST1Q10588 318 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 ACAP1Q15027 740 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 HSF5Q4G112 596 aaPredicted RBP18.37■□□□□ 0.53
SDCBP-202ENST00000413219 TMCO4Q5TGY1 634 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 ADGRG6Q86SQ4 1221 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 KCTD6Q8NC69 237 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 TFAP2BQ92481 460 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 GMLQ99445 158 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 RSAD1Q9HA92 442 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 PPARGC1AQ9UBK2 798 aaKnown RBP18.37■□□□□ 0.53
SDCBP-202ENST00000413219 PGAP2Q9UHJ9 254 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 SORCS3Q9UPU3 1222 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 TTLL3Q9Y4R7 772 aa18.37■□□□□ 0.53
SDCBP-202ENST00000413219 FKBP6O75344 327 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 LYNP07948 512 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 BAATQ14032 418 aaPredicted RBP18.36■□□□□ 0.53
SDCBP-202ENST00000413219 PTPN20Q4JDL3 420 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 TEX44Q53QW1 395 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 KCNT1Q5JUK3 1230 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 RIPOR1Q6ZS17 1223 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 ULK2Q8IYT8 1036 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 JOSD2Q8TAC2 188 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 TMEM143Q96AN5 459 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 ECSITQ9BQ95 431 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 DHX33Q9H6R0 707 aaKnown RBP18.36■□□□□ 0.53
SDCBP-202ENST00000413219 NDE1Q9NXR1 346 aa18.36■□□□□ 0.53
SDCBP-202ENST00000413219 ZNF219Q9P2Y4 722 aaPredicted RBP18.36■□□□□ 0.53
SDCBP-202ENST00000413219 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.36■□□□□ 0.53
SDCBP-202ENST00000413219 SUPT20HL2P0C7V6 817 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 TMPRSS15P98073 1019 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 NOMO1Q15155 1222 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 SUPT20HL1Q3ZLR7 823 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 AAGABQ6PD74 315 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 CDHR3Q6ZTQ4 885 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 KIAA0319LQ8IZA0 1049 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 TAB3Q8N5C8 712 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-202ENST00000413219 SPATA18Q8TC71 538 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 MTBPQ96DY7 904 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 PANX3Q96QZ0 392 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 CCDC106Q9BWC9 280 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 IL1RAPL1Q9NZN1 696 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 BIRC5O15392 142 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 CD48P09326 243 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 PRKCHP24723 683 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 CPA2P48052 419 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 MYL6P60660 151 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 DYNC1I2Q13409 638 aaKnown RBP18.35■□□□□ 0.53
SDCBP-202ENST00000413219 DBN1Q16643 649 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 DENND1BQ6P3S1 775 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 ZPBP2Q6X784 338 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 CRLF3Q8IUI8 442 aa18.35■□□□□ 0.53
SDCBP-202ENST00000413219 ARID3BQ8IVW6 561 aaPredicted RBP18.35■□□□□ 0.53
SDCBP-202ENST00000413219 MED7O43513 233 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 SNNO75324 88 aaPredicted RBP18.34■□□□□ 0.53
SDCBP-202ENST00000413219 AP1G2O75843 785 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 RGS20O76081 388 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 SERPINA6P08185 405 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 PSMC1P62191 440 aaKnown RBP18.34■□□□□ 0.53
SDCBP-202ENST00000413219 WASHC5Q12768 1159 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 MTM1Q13496 603 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 SURF1Q15526 300 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 ZNF394Q53GI3 561 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 DARS2Q6PI48 645 aaKnown RBP18.34■□□□□ 0.53
SDCBP-202ENST00000413219 IZUMO2Q6UXV1 221 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 PRPF39Q86UA1 669 aaKnown RBP18.34■□□□□ 0.53
SDCBP-202ENST00000413219 NSUN6Q8TEA1 469 aaKnown RBP18.34■□□□□ 0.53
SDCBP-202ENST00000413219 PPP2R3CQ969Q6 453 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 AZIN2Q96A70 460 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 ACAP3Q96P50 834 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 SIKE1Q9BRV8 207 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 RNF146Q9NTX7 359 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 PAK5Q9P286 719 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 SLC7A8Q9UHI5 535 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 RFPL1O75677 317 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 ENDOD1O94919 500 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 TRUB2O95900 331 aaKnown RBP18.34■□□□□ 0.53
SDCBP-202ENST00000413219 POLE2P56282 527 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 YWHAZP63104 245 aaKnown RBP18.34■□□□□ 0.53
SDCBP-202ENST00000413219 MRPS5P82675 430 aaKnown RBP18.34■□□□□ 0.53
SDCBP-202ENST00000413219 HNRNPDQ14103 355 aaKnown RBP18.34■□□□□ 0.53
SDCBP-202ENST00000413219 TFDP2Q14188 446 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 CHI3L2Q15782 390 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 FAM47CQ5HY64 1035 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 SCARA3Q6AZY7 606 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 PPM1NQ8N819 430 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 MTMR14Q8NCE2 650 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 FBXO27Q8NI29 283 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 FAF2Q96CS3 445 aa18.34■□□□□ 0.53
SDCBP-202ENST00000413219 KRT38O76015 456 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 OATP04181 439 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 EDN1P05305 212 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 MIPP30301 263 aa18.33■□□□□ 0.52
SDCBP-202ENST00000413219 DUOXA2Q1HG44 320 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms