RNA–Protein interactions for RNA: ENST00000412966.5

RAB5A-202, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-202ENST00000412966 SNX25Q9H3E2 840 aa14.59□□□□□ -0.07
RAB5A-202ENST00000412966 POLMQ9NP87 494 aaPredicted RBP14.59□□□□□ -0.07
RAB5A-202ENST00000412966 ARHGEF4Q9NR80 690 aa14.59□□□□□ -0.07
RAB5A-202ENST00000412966 EHD2Q9NZN4 543 aa14.59□□□□□ -0.07
RAB5A-202ENST00000412966 ATXN2Q99700 1313 aaKnown RBP14.59□□□□□ -0.07
RAB5A-202ENST00000412966 MYH10P35580 1976 aa14.58□□□□□ -0.07
RAB5A-202ENST00000412966 FREM2Q5SZK8 3169 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 ADH1CP00326 375 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 MBL2P11226 248 aaPredicted RBP14.58□□□□□ -0.08
RAB5A-202ENST00000412966 ENGP17813 658 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 TNFRSF4P43489 277 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 MAPK8P45983 427 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 IFRD2Q12894 506 aaPredicted RBP14.58□□□□□ -0.08
RAB5A-202ENST00000412966 LMAN2Q12907 356 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 EOGTQ5NDL2 527 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 PEAR1Q5VY43 1037 aaPredicted RBP14.58□□□□□ -0.08
RAB5A-202ENST00000412966 TDRD10Q5VZ19 366 aaKnown RBP14.58□□□□□ -0.08
RAB5A-202ENST00000412966 KIAA1211LQ6NV74 962 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 SLC23A3Q6PIS1 610 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 PIP4P1Q86T03 277 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 ETFBKMTQ8IXQ9 262 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 CCDC65Q8IXS2 484 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 OR6B3Q8NGW1 331 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 SLITRK1Q96PX8 696 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 USP28Q96RU2 1077 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 NUSAP1Q9BXS6 441 aaKnown RBP14.58□□□□□ -0.08
RAB5A-202ENST00000412966 B3GNT5Q9BYG0 378 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 ELOVL4Q9GZR5 314 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 GZF1Q9H116 711 aaPredicted RBP14.58□□□□□ -0.08
RAB5A-202ENST00000412966 FSCN3Q9NQT6 498 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 BCCIPQ9P287 314 aaKnown RBP eCLIP14.58□□□□□ -0.08
RAB5A-202ENST00000412966 HCN2Q9UL51 889 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 CIZ1Q9ULV3 898 aaPredicted RBP14.58□□□□□ -0.08
RAB5A-202ENST00000412966 MORC2Q9Y6X9 1032 aaPredicted RBP14.58□□□□□ -0.08
RAB5A-202ENST00000412966 NBEAQ8NFP9 2946 aa14.58□□□□□ -0.08
RAB5A-202ENST00000412966 LAMA5O15230 3695 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 TCRBV21S2A2A0A5A6 115 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 E2F8A0AVK6 867 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 TMEM8BA6NDV4 472 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 MAP3K13O43283 966 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 TGFB1I1O43294 461 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 COCHO43405 550 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 FAM163BP0C2L3 166 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 HOXB3P14651 431 aaPredicted RBP14.57□□□□□ -0.08
RAB5A-202ENST00000412966 ITPKAP23677 461 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 SPDYCQ5MJ68 293 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 LYSMD4Q5XG99 296 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 EPM2AIP1Q7L775 607 aaPredicted RBP14.57□□□□□ -0.08
RAB5A-202ENST00000412966 DDX42Q86XP3 938 aaKnown RBP eCLIP14.57□□□□□ -0.08
RAB5A-202ENST00000412966 PDILTQ8N807 584 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 RDH13Q8NBN7 331 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 B3GALNT2Q8NCR0 500 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 ZNF516Q92618 1163 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 FBXO32Q969P5 355 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 WBP2Q969T9 261 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 CGRRF1Q99675 332 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 KIAA1586Q9HCI6 787 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 TBC1D14Q9P2M4 693 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 PILRBQ9UKJ0 227 aa14.57□□□□□ -0.08
RAB5A-202ENST00000412966 ANKRD11Q6UB99 2663 aaPredicted RBP14.57□□□□□ -0.08
RAB5A-202ENST00000412966 SRRM3A6NNA2 597 aaPredicted RBP14.56□□□□□ -0.08
RAB5A-202ENST00000412966 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.56□□□□□ -0.08
RAB5A-202ENST00000412966 EIF3DO15371 548 aaKnown RBP eCLIP14.56□□□□□ -0.08
RAB5A-202ENST00000412966 HYAL3O43820 417 aaPredicted RBP14.56□□□□□ -0.08
RAB5A-202ENST00000412966 DLATP10515 647 aaKnown RBP14.56□□□□□ -0.08
RAB5A-202ENST00000412966 TNNI1P19237 187 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 YWHAQP27348 245 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 CYP24A1Q07973 514 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 SEMA3BQ13214 749 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 PSMD6Q15008 389 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 SLC39A14Q15043 492 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 E2F4Q16254 413 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 SNRNP35Q16560 246 aaKnown RBP14.56□□□□□ -0.08
RAB5A-202ENST00000412966 WDR72Q3MJ13 1102 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 NUP93Q8N1F7 819 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 NAT16Q8N8M0 369 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 SCAMP5Q8TAC9 235 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 OTUB2Q96DC9 234 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 TRIM9Q9C026 710 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 XYLT2Q9H1B5 865 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 TNMDQ9H2S6 317 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 AGPAT3Q9NRZ7 376 aa14.56□□□□□ -0.08
RAB5A-202ENST00000412966 CHORDC1Q9UHD1 332 aaPredicted RBP14.56□□□□□ -0.08
RAB5A-202ENST00000412966 FASNP49327 2511 aaKnown RBP14.55□□□□□ -0.08
RAB5A-202ENST00000412966 SPAARA0A1B0GVQ0 90 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 TBC1D3BA6NDS4 549 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 A8MXQ7 604 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 UPK3BL1B0FP48 263 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 UPK3BL2E5RIL1 263 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 TRIM24O15164 1050 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 CLIC2O15247 247 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 HOXC11O43248 304 aaPredicted RBP14.55□□□□□ -0.08
RAB5A-202ENST00000412966 TULP3O75386 442 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 RTN3O95197 1032 aaPredicted RBP14.55□□□□□ -0.08
RAB5A-202ENST00000412966 STAU1O95793 577 aaKnown RBP14.55□□□□□ -0.08
RAB5A-202ENST00000412966 GABRG2P18507 467 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 PDCP20941 246 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 SYT1P21579 422 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 MYL6P60660 151 aa14.55□□□□□ -0.08
RAB5A-202ENST00000412966 TNNC1P63316 161 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms