RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 ZNF844Q08AG5 666 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 TCF15Q12870 199 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 HS1BP3Q53T59 392 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 C1QL3Q5VWW1 255 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 MAMDC4Q6UXC1 1216 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 B4GALNT4Q76KP1 1039 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 GATAD2AQ86YP4 633 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 RHOT2Q8IXI1 618 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 TEX11Q8IYF3 940 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 ZNF808Q8N4W9 903 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-204ENST00000412061 VGLL2Q8N8G2 317 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 DNERQ8NFT8 737 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 OR1N1Q8NGS0 311 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 CSGALNACT1Q8TDX6 532 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 IPCEF1Q8WWN9 437 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-204ENST00000412061 THAP4Q8WY91 577 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 SNX27Q96L92 541 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 MOGAT1Q96PD6 335 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 PNKPQ96T60 521 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 MPHOSPH8Q99549 860 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 MNTQ99583 582 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 SMOQ99835 787 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 SPATA5L1Q9BVQ7 753 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 SSBP3Q9BWW4 388 aaPredicted RBP5.04□□□□□ -1.6
BRCA1-204ENST00000412061 TLR10Q9BXR5 811 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 GPR87Q9BY21 358 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 GPR63Q9BZJ6 419 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 CHST8Q9H2A9 424 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 CEP72Q9P209 647 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 XPR1Q9UBH6 696 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 ZNF212Q9UDV6 495 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 VPS28Q9UK41 221 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 CDYLQ9Y232 598 aa5.04□□□□□ -1.6
BRCA1-204ENST00000412061 TMEM233B4DJY2 109 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 DIRC3C9JPN6 131 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 MASP2O00187 686 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 LEFTY2O00292 366 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 POLRMTO00411 1230 aaKnown RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 ZNF623O75123 536 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 ACTL6BO94805 426 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 HNRNPA1P09651 372 aaKnown RBP eCLIP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 XRCC6P12956 609 aaKnown RBP eCLIP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 ACO1P21399 889 aaKnown RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 CTNNA1P35221 906 aaKnown RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 PNLIPRP1P54315 467 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 WNT3P56703 355 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 ARF3P61204 181 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 ARF1P84077 181 aaKnown RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 CUL4AQ13619 759 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 FAM102AQ5T9C2 384 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 DCAF12L1Q5VU92 463 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 METRNLQ641Q3 311 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 ARL6IP4Q66PJ3 421 aaKnown RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 Q6ZSN1 163 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 PPP1R32Q7Z5V6 425 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 CFAP52Q8N1V2 620 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 ZNF713Q8N859 430 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 CCDC191Q8NCU4 936 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 OR56A3Q8NH54 315 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 Q8TCH9 128 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 ATRIPQ8WXE1 791 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 RSPH1Q8WYR4 309 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 VMP1Q96GC9 406 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 MARS2Q96GW9 593 aaKnown RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 DCLRE1CQ96SD1 692 aaKnown RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 BAG1Q99933 345 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 SLF1Q9BQI6 1058 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 DDX23Q9BUQ8 820 aaKnown RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 MS4A7Q9GZW8 240 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 PABPC3Q9H361 631 aaKnown RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 RNPEPQ9H4A4 650 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 HESX1Q9UBX0 185 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 CFDP1Q9UEE9 299 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 RGS17Q9UGC6 210 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-204ENST00000412061 CNPY2Q9Y2B0 182 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 ATP11BQ9Y2G3 1177 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 HS3ST4Q9Y661 456 aa5.03□□□□□ -1.6
BRCA1-204ENST00000412061 B8ZZF3 427 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 SPTLC2O15270 562 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 RASSF9O75901 435 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 MTA2O94776 668 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 USP1O94782 785 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 APOA4P06727 396 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 SPATA31D3P0C874 917 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 CYP2C9P11712 490 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 IDEP14735 1019 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 IL1R1P14778 569 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 FDXRP22570 491 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 CHMP24386 653 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 HIBADHP31937 336 aaKnown RBP5.02□□□□□ -1.61
BRCA1-204ENST00000412061 APOBEC3AP31941 199 aaPredicted RBP5.02□□□□□ -1.61
BRCA1-204ENST00000412061 HOXD13P35453 343 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 VIPR2P41587 438 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 RNASE9P60153 205 aaKnown RBP5.02□□□□□ -1.61
BRCA1-204ENST00000412061 ACTR2P61160 394 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 AP2B1P63010 937 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 KRT83P78385 493 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 RILPL1Q5EBL4 403 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 Q6ZRM9 215 aa5.02□□□□□ -1.61
BRCA1-204ENST00000412061 SPATA31D4Q6ZUB0 917 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms