RNA–Protein interactions for RNA: ENST00000411913.1

HMGB3P2-201, Transcript of high mobility group box 3 pseudogene 2, humanhuman

BASIC

Gene HMGB3P2, Length 584 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P2-201ENST00000411913 MAP3K14Q99558 947 aa3.03□□□□□ -1.92
HMGB3P2-201ENST00000411913 VRK1Q99986 396 aaPredicted RBP3.03□□□□□ -1.92
HMGB3P2-201ENST00000411913 GTPBP4Q9BZE4 634 aaKnown RBP3.03□□□□□ -1.92
HMGB3P2-201ENST00000411913 ZNF700Q9H0M5 742 aa3.03□□□□□ -1.92
HMGB3P2-201ENST00000411913 MLXIPQ9HAP2 919 aa3.03□□□□□ -1.92
HMGB3P2-201ENST00000411913 TRMT13Q9NUP7 481 aaKnown RBP3.03□□□□□ -1.92
HMGB3P2-201ENST00000411913 TMEM184CQ9NVA4 438 aa3.03□□□□□ -1.92
HMGB3P2-201ENST00000411913 SERPINB13Q9UIV8 391 aa3.03□□□□□ -1.92
HMGB3P2-201ENST00000411913 AGAP1Q9UPQ3 857 aa3.03□□□□□ -1.92
HMGB3P2-201ENST00000411913 IPPQ9Y573 584 aa3.03□□□□□ -1.92
HMGB3P2-201ENST00000411913 FRMPD2Q68DX3 1309 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 CCDC154A6NI56 674 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 H3BML4 177 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 HTRA2O43464 458 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 DTNBO60941 627 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 TOMM40O96008 361 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 EDNRBP24530 442 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 ZNF267Q14586 743 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 GRM3Q14832 879 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 PGS1Q32NB8 556 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 KHDC1Q4VXA5 237 aaKnown RBP3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 ARHGAP40Q5TG30 622 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 MTHFD1LQ6UB35 978 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 GSG1LQ6UXU4 331 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 KSR2Q6VAB6 950 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 SRGAP1Q7Z6B7 1085 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 CATIPQ7Z7H3 387 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 PIP4P1Q86T03 277 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 USP37Q86T82 979 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 SLC15A3Q8IY34 581 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 ARFGAP1Q8N6T3 406 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 DIS3LQ8TF46 1054 aaKnown RBP3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 ATG4AQ8WYN0 398 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 TTC17Q96AE7 1141 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 MVB12AQ96EY5 273 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 WBP1Q96G27 269 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 CCDC17Q96LX7 622 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 LENG8Q96PV6 779 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 SARGQ9BW04 601 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 DDX21Q9NR30 783 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 LIMCH1Q9UPQ0 1083 aa3.02□□□□□ -1.93
HMGB3P2-201ENST00000411913 TCRBV5S1A1TA0A578 114 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 M0QYG6 137 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 TLR2O60603 784 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 PEX14O75381 377 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 TJP3O95049 919 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 HRGP04196 525 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 GNAI2P04899 355 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 PHKG2P15735 406 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 RHBDL3P58872 404 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 SNAPC2Q13487 334 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 GRAMD1CQ8IYS0 662 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 FAM46DQ8NEK8 389 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 PJA1Q8NG27 643 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 NR4A3Q92570 626 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 KAT5Q92993 513 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 TIFAQ96CG3 184 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 SLC39A13Q96H72 371 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 SLC46A1Q96NT5 459 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 ACO2Q99798 780 aaKnown RBP3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 THAP7Q9BT49 309 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 DPCDQ9BVM2 203 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 TTYH3Q9C0H2 523 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 FAM204AQ9H8W3 233 aa3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 DDX20Q9UHI6 824 aaKnown RBP3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 CFAP20Q9Y6A4 193 aaKnown RBP3.01□□□□□ -1.93
HMGB3P2-201ENST00000411913 ANO9A1A5B4 782 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 PRSS29PA6NIE9 313 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 SLC28A2O43868 658 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 TUSC2O75896 110 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 ZBED1O96006 694 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 RHCEP18577 417 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 CDC25AP30304 524 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 PIK3CGP48736 1102 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 PXNP49023 591 aaPredicted RBP3□□□□□ -1.93
HMGB3P2-201ENST00000411913 FXR1P51114 621 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB3P2-201ENST00000411913 SRSF1Q07955 248 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB3P2-201ENST00000411913 TCF15Q12870 199 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 BIRC2Q13490 618 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 BOP1Q14137 746 aaKnown RBP3□□□□□ -1.93
HMGB3P2-201ENST00000411913 GALEQ14376 348 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 C3orf36Q3SXR2 165 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 THEMIS2Q5TEJ8 643 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 GFI1BQ5VTD9 330 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 FAM160B1Q5W0V3 765 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 ANO7Q6IWH7 933 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 PPP4R4Q6NUP7 873 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 OVCH2Q7RTZ1 564 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 PPP1R32Q7Z5V6 425 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 C11orf96Q7Z7L8 435 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 RFX6Q8HWS3 928 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 DENND1CQ8IV53 801 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 PELI3Q8N2H9 469 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 SAMD3Q8N6K7 520 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 ZBTB34Q8NCN2 500 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 SVIPQ8NHG7 77 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 DDX17Q92841 729 aaKnown RBP3□□□□□ -1.93
HMGB3P2-201ENST00000411913 PMM1Q92871 262 aa3□□□□□ -1.93
HMGB3P2-201ENST00000411913 DMRTA2Q96SC8 542 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms