RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TBC1D3BA6NDS4 549 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 CLDN5O00501 218 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 EIF3DO15371 548 aaKnown RBP eCLIP17.76■□□□□ 0.43
MRPL55-220ENST00000411464 PTGER3P43115 390 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 MAPK8P45983 427 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 CACNA2D1P54289 1103 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 ASIC1P78348 528 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 PSMD6Q15008 389 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 HECTD3Q5T447 861 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 LYSMD4Q5XG99 296 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 FRMD1Q8N878 549 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 KDF1Q8NAX2 398 aaPredicted RBP17.76■□□□□ 0.43
MRPL55-220ENST00000411464 B3GALNT2Q8NCR0 500 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 DEFB124Q8NES8 71 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 ZNF507Q8TCN5 953 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 OVCA2Q8WZ82 227 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 FBXO32Q969P5 355 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 OTUB2Q96DC9 234 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 CGRRF1Q99675 332 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 B3GNT5Q9BYG0 378 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 ADAM33Q9BZ11 813 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 TRIM9Q9C026 710 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 AGPAT3Q9NRZ7 376 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 TMEM74BQ9NUR3 256 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 NXF1Q9UBU9 619 aaKnown RBP17.76■□□□□ 0.43
MRPL55-220ENST00000411464 CHORDC1Q9UHD1 332 aaPredicted RBP17.76■□□□□ 0.43
MRPL55-220ENST00000411464 WASF3Q9UPY6 502 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 SH3BP1Q9Y3L3 701 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 NME7Q9Y5B8 376 aa17.76■□□□□ 0.43
MRPL55-220ENST00000411464 ZNF638Q14966 1978 aaKnown RBP17.75■□□□□ 0.43
MRPL55-220ENST00000411464 DENND4CQ5VZ89 1909 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 CLIC2O15247 247 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 COCHO43405 550 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 ADAM23O75077 832 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 PHACTR2O75167 634 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 ATICP31939 592 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 CYP2J2P51589 502 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 ATXN3P54252 364 aaPredicted RBP17.75■□□□□ 0.43
MRPL55-220ENST00000411464 SNRPFP62306 86 aaKnown RBP17.75■□□□□ 0.43
MRPL55-220ENST00000411464 CYP24A1Q07973 514 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 MAP7D1Q3KQU3 841 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 TRMT11Q7Z4G4 463 aaKnown RBP17.75■□□□□ 0.43
MRPL55-220ENST00000411464 NAT16Q8N8M0 369 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 XXYLT1Q8NBI6 393 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 KCNV2Q8TDN2 545 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 SYAP1Q96A49 352 aaPredicted RBP17.75■□□□□ 0.43
MRPL55-220ENST00000411464 SCNM1Q9BWG6 230 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 CUEDC2Q9H467 287 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 ZDHHC4Q9NPG8 344 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 TMEM30AQ9NV96 361 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 KBTBD4Q9NVX7 518 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 DEC1Q9P2X7 70 aa17.75■□□□□ 0.43
MRPL55-220ENST00000411464 MBD1Q9UIS9 605 aaPredicted RBP17.75■□□□□ 0.43
MRPL55-220ENST00000411464 ATP8B3O60423 1300 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 TMEM8BA6NDV4 472 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 ZBTB24O43167 697 aaPredicted RBP17.74■□□□□ 0.43
MRPL55-220ENST00000411464 TGFB1I1O43294 461 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 AP5Z1O43299 807 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 CLSTN1O94985 981 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 CFIP05156 583 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 CHRM1P11229 460 aaPredicted RBP17.74■□□□□ 0.43
MRPL55-220ENST00000411464 ENGP17813 658 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 MYL6P60660 151 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 STK38Q15208 465 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 ANO4Q32M45 955 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 FAM26FQ5R3K3 315 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 SLC23A3Q6PIS1 610 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 EPM2AIP1Q7L775 607 aaPredicted RBP17.74■□□□□ 0.43
MRPL55-220ENST00000411464 NELFCDQ8IXH7 590 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 KCNK16Q96T55 309 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 MED10Q9BTT4 135 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 NACA2Q9H009 215 aa17.74■□□□□ 0.43
MRPL55-220ENST00000411464 ZSCAN16Q9H4T2 348 aaPredicted RBP17.74■□□□□ 0.43
MRPL55-220ENST00000411464 OBSL1O75147 1896 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 HOXC11O43248 304 aaPredicted RBP17.73■□□□□ 0.43
MRPL55-220ENST00000411464 TULP3O75386 442 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 STAU1O95793 577 aaKnown RBP17.73■□□□□ 0.43
MRPL55-220ENST00000411464 TOP3BO95985 862 aaKnown RBP17.73■□□□□ 0.43
MRPL55-220ENST00000411464 HOXD12P35452 270 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 SLC36A4Q6YBV0 504 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 PHTF2Q8N3S3 785 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 ZNF513Q8N8E2 541 aaPredicted RBP17.73■□□□□ 0.43
MRPL55-220ENST00000411464 IQUBQ8NA54 791 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 SCAMP5Q8TAC9 235 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 CEP76Q8TAP6 659 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 ZNF516Q92618 1163 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 DHX58Q96C10 678 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 TNIP3Q96KP6 325 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 PILRBQ9UKJ0 227 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 EML5Q05BV3 1969 aa17.73■□□□□ 0.43
MRPL55-220ENST00000411464 ITPKAP23677 461 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 NASPP49321 788 aaPredicted RBP17.72■□□□□ 0.43
MRPL55-220ENST00000411464 TUBP50607 506 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 RPL6Q02878 288 aaKnown RBP17.72■□□□□ 0.43
MRPL55-220ENST00000411464 GFPT1Q06210 699 aaPredicted RBP17.72■□□□□ 0.43
MRPL55-220ENST00000411464 E2F4Q16254 413 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 DUOXA1Q1HG43 343 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 C10orf76Q5T2E6 689 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 SNX30Q5VWJ9 437 aa17.72■□□□□ 0.43
MRPL55-220ENST00000411464 SDE2Q6IQ49 451 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms